DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13716 and halo

DIOPT Version :10

Sequence 1:NP_647920.1 Gene:CG13716 / 38567 FlyBaseID:FBgn0035563 Length:117 Species:Drosophila melanogaster
Sequence 2:NP_001137765.1 Gene:halo / 33334 FlyBaseID:FBgn0001174 Length:109 Species:Drosophila melanogaster


Alignment Length:80 Identity:33/80 - (41%)
Similarity:47/80 - (58%) Gaps:5/80 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PSQNSP-PKSPTAAYAMFLHREELRRRKLHVSRVSVTKIHLTSELIAQTKQNIRQCSFEDLEI-- 79
            |....| |..|:..|.:|.:|||||||.....::|..|:|||..||.||.:||||  ::.:||  
  Fly     7 PQLERPLPSLPSLHYTLFAYREELRRRDAPFMKMSTIKLHLTDNLILQTIKNIRQ--YDTIEIMN 69

  Fly    80 LARETLFKKNLQRNL 94
            |.:|..||:.|.:.:
  Fly    70 LNQEINFKRRLTKQM 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13716NP_647920.1 DUF733 26..105 CDD:428418 30/71 (42%)
haloNP_001137765.1 DUF733 17..100 CDD:428418 30/70 (43%)

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