DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC1 and HOS2

DIOPT Version :9

Sequence 1:NP_647918.2 Gene:HDAC1 / 38565 FlyBaseID:FBgn0015805 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_011321.1 Gene:HOS2 / 852681 SGDID:S000003162 Length:452 Species:Saccharomyces cerevisiae


Alignment Length:421 Identity:214/421 - (50%)
Similarity:295/421 - (70%) Gaps:22/421 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSDEYVR 72
            ||.|:::|.:.:|:||..|||||.|:.:|.:|:.:|||::.|::|....||.||:.:|||::||.
Yeast    27 RVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHSEDYVN 91

  Fly    73 FLRSIRPDNMSEYNK-QMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGG 136
            ||..:.|:|.::..: .::.||:|:|||:|..||::..|..|.|:.|..||....|:|.|||.||
Yeast    92 FLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQSDIAINWSGG 156

  Fly   137 LHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKY-G 200
            ||||||:..|||||||||||.||.||:||.|:||||||:||||||:|||||||||.|:||||| |
Yeast   157 LHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKYNG 221

  Fly   201 EYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISKVMETFQPAAVVLQCGADSLT 265
            |:|||||||.:||..|||::|:|:||.||:|||:|.::|..|:..::.||:|..:|.|||||||.
Yeast   222 EFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDPLIMTFKPTLIVQQCGADSLG 286

  Fly   266 GDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTIRNVSRCWTYET----SVALAVEIANEL 326
            .||||||||.:|.||:||:|||.:.||.|:|||||||.|||||.|||||    .|.|..:|..::
Yeast   287 HDRLGCFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRNVSRLWTYETGILNDVLLPEDIPEDI 351

  Fly   327 PYNDYFEYFGPDFKLHISPSNM-TNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQA--IP----- 383
            |:.|   .||||:.|:....:: .|:|:.:.||.|:.|..||:|.|..||.|::.|  ||     
Yeast   352 PFRD---SFGPDYSLYPMLDDLYENKNSKKLLEDIRIRCLENIRYLQGAPSVRMDAECIPTQDIS 413

  Fly   384 -----EDAINDESDDEDKVDKDDRLPQSDKD 409
                 ||.|..|.::|.:.|..:||.:.:|:
Yeast   414 ALTEEEDKIIQEMNEETEADSSNRLEEMEKE 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC1NP_647918.2 Arginase_HDAC 5..372 CDD:388375 198/370 (54%)
HOS2NP_011321.1 HDAC_Hos2 28..338 CDD:212540 178/309 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0123
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S54
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000617
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100248
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.660

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