DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC1 and hda10

DIOPT Version :9

Sequence 1:NP_647918.2 Gene:HDAC1 / 38565 FlyBaseID:FBgn0015805 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_190052.1 Gene:hda10 / 823592 AraportID:AT3G44660 Length:142 Species:Arabidopsis thaliana


Alignment Length:155 Identity:61/155 - (39%)
Similarity:89/155 - (57%) Gaps:17/155 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 FNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTIRNVSRCWTYETSVALAVEIANELPYNDYFEYFG 336
            |::...||.:|                ||||..||:||||.||.:.|..|:.||:|.|||.:||.
plant     3 FSMLFTGHAEC----------------GGYTKENVARCWTVETGILLDTELPNEIPENDYIKYFA 51

  Fly   337 PDFKLHISPSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPEDAINDESDDEDKVDKDD 401
            |||.|.|...::.|.||..|:..||.::.||||.:.|||.||:|.:|.|....:. |||:.:.|.
plant    52 PDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPDF-DEDEQNPDV 115

  Fly   402 RLPQSDKDKRIVPENEYSDSEDEGE 426
            |:.|..:||:|..::||.|.:::.:
plant   116 RVDQRSRDKQIQRDDEYFDGDNDND 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC1NP_647918.2 Arginase_HDAC 5..372 CDD:388375 41/99 (41%)
hda10NP_190052.1 Arginase_HDAC <3..100 CDD:302587 48/112 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0123
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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