DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC1 and AT4G09784

DIOPT Version :10

Sequence 1:NP_647918.2 Gene:HDAC1 / 38565 FlyBaseID:FBgn0015805 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001154218.1 Gene:AT4G09784 / 6240301 AraportID:AT4G09784 Length:70 Species:Arabidopsis thaliana


Alignment Length:54 Identity:15/54 - (27%)
Similarity:22/54 - (40%) Gaps:18/54 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 HPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATADEMTK----------FHS 67
            ||.:|.|:|.....|...|::  |.:.|      .|.|:||          ||:
plant    12 HPERPDRLRAIAASLDTAGVFPGRCLPI------NAGEITKQELQMYFCKQFHN 59

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC1NP_647918.2 Arginase_HDAC 5..372 CDD:450134 15/54 (28%)
AT4G09784NP_001154218.1 Arginase_HDAC 12..>50 CDD:450134 13/43 (30%)

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