DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC1 and hdac10

DIOPT Version :9

Sequence 1:NP_647918.2 Gene:HDAC1 / 38565 FlyBaseID:FBgn0015805 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_021326130.1 Gene:hdac10 / 327253 ZFINID:ZDB-GENE-030131-5464 Length:723 Species:Danio rerio


Alignment Length:467 Identity:105/467 - (22%)
Similarity:174/467 - (37%) Gaps:124/467 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSDEYVRFLRSIRPDNMSEYNKQMQRFNV 94
            |.|:.:::..|..:||.::.:.....:||..|:...||:||:..::.....|:.|.....:::| 
Zfish    78 PERLTVSYEALRTHGLAQRCKAVPVRQATEQEILLAHSEEYLEAVKQTPGMNVEELMAFSKKYN- 141

  Fly    95 GEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGL-----HHAKKSEASGFCYVNDI 154
              |......:|...:|:||.::.....:.|:.    :..|..|     ||:::|.|:|||..|::
Zfish   142 --DVYFHQNIYHCAKLAAGATLQLVDSVMKRE----VRNGMALVRPPGHHSQRSAANGFCVFNNV 200

  Fly   155 VLGILELLKYH--QRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPG--TGDLRDIG 213
            .:..|...|.:  .|:|.:|.|||||.|::..|.....|:..|:|:|  ..::|.  ..|...:|
Zfish   201 AIAALYAKKNYNLNRILIVDWDVHHGQGIQYCFEEDPSVLYFSWHRYEHQSFWPNLPESDYSSVG 265

  Fly   214 AGKGKYYAVNIPL-RDGMDDDAYESIFVPIISKVMETFQPAAVVLQCGADSLTGDRLG--CFNLT 275
            .|||..:.:|:|. :.||.:..|.:.|..::..|...|.|..|::..|.||..||..|  |....
Zfish   266 KGKGSGFNINLPWNKVGMTNSDYLAAFFHVLLPVAYEFDPELVIVSAGFDSAIGDPEGEMCALPE 330

  Fly   276 VKGH----------GK-CVEFVKKYNLPFLMVGGGGYTIRNV--SRCWTYETSVALAVEIANELP 327
            :..|          || ||            |..|||.:.::  |.|.|..:.:.          
Zfish   331 IFAHLTHLLMPLAAGKMCV------------VLEGGYNLTSLGQSVCQTVHSLLG---------- 373

  Fly   328 YNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPEDAINDESD 392
                      |....||.......:..|.::.::|..........|                   
Zfish   374 ----------DPTPRISGLGTACDSALESIQNVRNVQSSYWSSFKH------------------- 409

  Fly   393 DEDKVDKDDRLPQSDKDKRIVPENEYSDSEDEGEGGRRDNRSYKGQRKRPRLDKDTNSNKASSET 457
                      |.||:.:.                             ||||||......|.|||.
Zfish   410 ----------LAQSETNP-----------------------------KRPRLDATNGGPKESSEP 435

  Fly   458 SSEIKDEKEKGD 469
            :||...:|...|
Zfish   436 ASESNPKKTAQD 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC1NP_647918.2 Arginase_HDAC 5..372 CDD:388375 87/368 (24%)
hdac10XP_021326130.1 HDAC10 68..404 CDD:212546 87/364 (24%)
Arginase_HDAC <607..717 CDD:327367
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0123
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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