DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC1 and hos2

DIOPT Version :10

Sequence 1:NP_647918.2 Gene:HDAC1 / 38565 FlyBaseID:FBgn0015805 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_594079.1 Gene:hos2 / 2543643 PomBaseID:SPAC3G9.07C Length:434 Species:Schizosaccharomyces pombe


Alignment Length:414 Identity:219/414 - (52%)
Similarity:299/414 - (72%) Gaps:13/414 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSDEY 70
            ||||.|:.|..:|||:||..||||||||.:|::|::.|||:.||.::.|..||..||::||.::|
pombe    25 KKRVTYHLDEQVGNYHYGDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSEFHREDY 89

  Fly    71 VRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGG 135
            :.||:.:.|||..::..:.|:||:|:|||||||.|||.|.|||.|:.|:.||.:..::|.|||.|
pombe    90 LDFLKRVTPDNAEQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQGQTDIAINWSG 154

  Fly   136 GLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKY- 199
            ||||||:.|||||||||||||.||.:|::..||||||||:||||||::|||.:|||:||||||| 
pombe   155 GLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQAFYESDRVLTVSFHKYN 219

  Fly   200 GEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISKVMETFQPAAVVLQCGADSL 264
            |::||.||:..:.|...|||:|:|:||.||:.|:.|.|:|..||...:.||||:|:|||||||||
pombe   220 GDFFPATGNFDENGVKGGKYFALNVPLEDGIGDEQYTSLFKSIIEPTINTFQPSAIVLQCGADSL 284

  Fly   265 TGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTIRNVSRCWTYETSVALAVEIANELPYN 329
            ..||||.|||::..||:||.|.:.:|:|.|:|||||||:|||:|.|.||||:.:..:|.:|||..
pombe   285 GYDRLGVFNLSIHAHGECVRFTRSFNIPMLVVGGGGYTLRNVARAWCYETSICVNEQIPSELPRE 349

  Fly   330 D-YFEYFGPDFKLHISP---SNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPEDAINDE 390
            . |:|:|.||:.||  |   :.:.|:||.:.||.::.|..|.||.|..||.||:|.||.| :...
pombe   350 TLYYEFFAPDYTLH--PRLTTKIENKNTPKALEDLRIRALEQLRYLGGAPSVQMQQIPPD-LTGH 411

  Fly   391 SDDEDKVDKDDRLPQSDK--DKRI 412
            .::||:...|:.|   ||  |.|:
pombe   412 LEEEDERLNDEYL---DKAVDVRV 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC1NP_647918.2 Arginase_HDAC 5..372 CDD:450134 202/370 (55%)
hos2NP_594079.1 HDAC_Hos2 28..337 CDD:212540 178/308 (58%)

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