DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC1 and Hdac10

DIOPT Version :10

Sequence 1:NP_647918.2 Gene:HDAC1 / 38565 FlyBaseID:FBgn0015805 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001403078.1 Gene:Hdac10 / 170787 MGIID:2158340 Length:667 Species:Mus musculus


Alignment Length:400 Identity:93/400 - (23%)
Similarity:175/400 - (43%) Gaps:74/400 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSDEYVRFLRSIRPDNMSEYNKQMQRFNV 94
            |.|:....:.|...||..:.......:|:.:|:...||.||:..::..:..:..|.:...:::|.
Mouse    28 PERLTAALDGLRQRGLEERCLCLSACEASEEELGLVHSPEYIALVQKTQTLDKEELHALSKQYNA 92

  Fly    95 GEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGL-----HHAKKSEASGFCYVNDI 154
            ....|   ..:...:|:||    ||::|........::.|..|     ||::::.|:|||..|::
Mouse    93 VYFHP---DTFHCARLAAG----AALQLVDAVLTGAVHNGLALVRPPGHHSQRAAANGFCVFNNV 150

  Fly   155 VLGILELLKYH--QRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKY--GEYFP--GTGDLRDIG 213
            .|......:.:  ||:|.:|.|||||.|::..|.....|:..|:|:|  |.::|  ...|...:|
Mouse   151 ALAAKHAKQKYGLQRILIVDWDVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVG 215

  Fly   214 AGKGKYYAVNIPLRD-GMDDDAYESIFVPIISKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVK 277
            .|:|:.:.||:|... ||.:..|.:.|:.::..:...|.|..|::..|.||..||..|....|  
Mouse   216 QGQGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQAT-- 278

  Fly   278 GHGKCVEFVKKYNLPFLMVGG-------GGYTIRNVSR--CWTYETSV----------------A 317
              .:|  |.....|..::.||       |||.:.::::  |...:|.:                |
Mouse   279 --PEC--FAHLTQLLQVLAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPTPPLLGLMVPCQSA 339

  Fly   318 L----AVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQ 378
            |    :|:.| :.||       ....:.:::|...::.::.|.         .:||:|..:|.. 
Mouse   340 LESIQSVQTA-QTPY-------WTSLQQNVAPVLSSSTHSPEE---------RSLRLLGESPTC- 386

  Fly   379 IQAIPEDAIN 388
              |:.||:::
Mouse   387 --AVAEDSLS 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC1NP_647918.2 Arginase_HDAC 5..372 CDD:450134 88/382 (23%)
Hdac10NP_001403078.1 Histone deacetylase 1..323 78/307 (25%)
Arginase_HDAC 18..354 CDD:450134 84/346 (24%)

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