DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC1 and Hdac2

DIOPT Version :10

Sequence 1:NP_647918.2 Gene:HDAC1 / 38565 FlyBaseID:FBgn0015805 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_032255.2 Gene:Hdac2 / 15182 MGIID:1097691 Length:488 Species:Mus musculus


Alignment Length:487 Identity:372/487 - (76%)
Similarity:421/487 - (86%) Gaps:4/487 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QSHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFH 66
            |...||:||||||.||||||||||||||||||||||||||||||||||||||||||||:||||:|
Mouse     5 QGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYH 69

  Fly    67 SDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICI 131
            ||||::|||||||||||||:||||||||||||||||||:||||||.|||||.|||||:|.:::.:
Mouse    70 SDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAV 134

  Fly   132 NWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSF 196
            ||.||||||||||||||||||||||.|||||||||||||||||:|||||||||||||||||||||
Mouse   135 NWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 199

  Fly   197 HKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISKVMETFQPAAVVLQCGA 261
            |||||||||||||||||||||||||||.|:|||:||::|..||.||||||||.:||:||||||||
Mouse   200 HKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGA 264

  Fly   262 DSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTIRNVSRCWTYETSVALAVEIANEL 326
            |||:||||||||||||||.||||.||.:|||.||:||||||||||:|||||||:|||..||.|||
Mouse   265 DSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNEL 329

  Fly   327 PYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPEDAINDES 391
            |||||||||||||||||||||||||||.||:||||.||||||||||||||||:|||||||::::|
Mouse   330 PYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDS 394

  Fly   392 DDEDKVDKDDRLPQSDKDKRIVPENEYSDSEDEGEGGRRDNRSYKGQRKRPRLDKDTNSNKASSE 456
            .|||..|.|.|:.....||||..:.|:||||||||||||:...:|...|:.|:::|   .|.:.:
Mouse   395 GDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEED---KKETED 456

  Fly   457 TSSEIKDEKEKGDGADGEESTASNTNSNNNSN 488
            ..:::|:|.:..|.: ||::......|...||
Mouse   457 KKTDVKEEDKSKDNS-GEKTDPKGAKSEQLSN 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC1NP_647918.2 Arginase_HDAC 5..372 CDD:450134 319/366 (87%)
Hdac2NP_032255.2 HDAC2 9..374 CDD:212535 318/364 (87%)
Histone deacetylase 9..322 272/312 (87%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..488 38/103 (37%)

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