DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC1 and HDAC1

DIOPT Version :10

Sequence 1:NP_647918.2 Gene:HDAC1 / 38565 FlyBaseID:FBgn0015805 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_061506669.1 Gene:HDAC1 / 1277106 VectorBaseID:AGAMI1_008714 Length:493 Species:Anopheles gambiae


Alignment Length:486 Identity:437/486 - (89%)
Similarity:457/486 - (94%) Gaps:17/486 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQSHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKF 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mosquito     1 MQSHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKF 65

  Fly    66 HSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEIC 130
            |||:|:||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Mosquito    66 HSDDYIRFLRSIRPDNMSEYNKHMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEIC 130

  Fly   131 INWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVS 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mosquito   131 INWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVS 195

  Fly   196 FHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISKVMETFQPAAVVLQCG 260
            ||||||||||||||||||||:||||||||||||||||::|:||||||||||||||||:|||||||
Mosquito   196 FHKYGEYFPGTGDLRDIGAGRGKYYAVNIPLRDGMDDESYDSIFVPIISKVMETFQPSAVVLQCG 260

  Fly   261 ADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTIRNVSRCWTYETSVALAVEIANE 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Mosquito   261 ADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTIRNVSRCWTYETSVALGVEIANE 325

  Fly   326 LPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPEDAINDE 390
            |||||||||||||||||||||||:||||:||||||||||||||||||||||||:|.|||||||||
Mosquito   326 LPYNDYFEYFGPDFKLHISPSNMSNQNTTEYLEKIKNRLFENLRMLPHAPGVQVQPIPEDAINDE 390

  Fly   391 SDDEDKVDKDDRLPQSDKDKRIVPENEYSDSEDEGEGGRRDNRSYKG--------QRKRPRLDKD 447
            |:||||||||:||||.||||||||:||:||||||||||||||||:||        .|||||::||
Mosquito   391 SEDEDKVDKDERLPQQDKDKRIVPDNEFSDSEDEGEGGRRDNRSFKGGQGAGQQQSRKRPRIEKD 455

  Fly   448 TNSNKASSETSSEIKDEKE-KGDGADGEEST 477
               .||     .|:||||| |.|.:..:|.|
Mosquito   456 ---GKA-----EEVKDEKEAKMDTSGDKEET 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC1NP_647918.2 Arginase_HDAC 5..372 CDD:450134 355/366 (97%)
HDAC1XP_061506669.1 None

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