Protein Alignment CG42540 and HIR1

DIOPT Version :10

• Sequence 1: NP_001246627.1
• Gene: CG42540 / 38562
• FlyBaseID: FBgn0260657
• Length: 517
• Species: Drosophila melanogaster
• Sequence 2: NP_201080.1
• Gene: HIR1 / 836395
• AraportID: AT5G62740
• Length: 286
• Species: Arabidopsis thaliana
• Alignment Length: 261
• Identity: 61/261 - (23%)
• Similarity: 108/261 - (41%)
• Gaps: 44/261 - (16%)

  Fly   205 SLFVCFKVVQEYERAVIFRLGRLMQGGAKGPGIFFILPCIDSYAR--VDLRTRTYDVPPQEVLTK 267
            :||.|.:|.|. ..|:....|:...  ...||..|:..|:.|...  :.||.:..|| ..|..||
plant     3 NLFCCVQVDQS-TVAIKETFGKFED--VLEPGCHFLPWCLGSQVAGYLSLRVQQLDV-RCETKTK 63

  Fly   268 DSVTVSVDAVVYYR--VSNATVSIANVENAHHSTRLLAQTTLRNTMGTRHLHEILSERMTISGTM 330
            |:|.|:|.|.:.||  .:.|..:...:.|.....:......:|.::....|.::..::..|:..:
plant    64 DNVFVNVVASIQYRALANKANDAYYKLSNTRGQIQAYVFDVIRASVPKLLLDDVFEQKNDIAKAV 128

  Fly   331 QVQLDEATDAWGIKVERVEIKDVRLPVQLQRAM---------------AAEAE-------AAREA 373
            :.:|::|..|:|.::.:..|.|:.....::|||               .||||       |..||
plant   129 EEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARMRLAANEKAEAEKILQIKRAEGEA 193

  Fly   374 RAKVIAAEGEQKASRALREA--SEVIG---DSPA---------ALQLRYLQTLNTISAEKNSTIV 424
            .:|.::..|..:..:|:.:.  ..|:|   :.|.         .|..:|..|:..|.|...|:.|
plant   194 ESKYLSGLGIARQRQAIVDGLRDSVLGFAVNVPGTTAKDVMDMVLVTQYFDTMKEIGASSKSSAV 258

  Fly   425 F 425
            |
plant   259 F 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42540	NP_001246627.1	SPFH_stomatin	229..430	CDD:259801	54/237 (23%)
HIR1	NP_201080.1	SPFH_like_u4	10..278	CDD:259805	58/254 (23%)