DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42540 and PHB7

DIOPT Version :10

Sequence 1:NP_001246627.1 Gene:CG42540 / 38562 FlyBaseID:FBgn0260657 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_199227.1 Gene:PHB7 / 834437 AraportID:AT5G44140 Length:278 Species:Arabidopsis thaliana


Alignment Length:235 Identity:50/235 - (21%)
Similarity:105/235 - (44%) Gaps:24/235 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 RAVIFRLGRLMQGGAKGPGIFFILPCIDSYARVDLRTRTYDVPPQEVLTKDSVTVSVDAVVYYR- 281
            ||::|.....::......|..|.:|..:.....|:|:|.| |...:..:.|..||::...|..| 
plant    44 RAIVFNRFTGIKDRVYPEGTHFKIPLFERAIIYDVRSRPY-VENSQTGSNDLQTVTIGLRVLTRP 107

  Fly   282 VSNATVSIANVENAHHSTRLL---AQTTLRNTMGTRHLHEILSERMTISGTMQVQLDEATDAWGI 343
            :.:....|......::..|:|   ...||:..:...:...::::|..:|..::..:.|....:.|
plant   108 MGDRLPEIYRTLGQNYGERVLPSIINETLKAVVAQYNASHLITQREAVSREIRKIVTERAAKFNI 172

  Fly   344 KVERVEIKDVRLPVQLQRAMAAEAEAAREA-RAK-------------VIAAEGEQKASRALREAS 394
            .::.|.|.:::...:...|:..:..||:|| |||             :|.|:||.|:::.:.:| 
plant   173 ALDDVSITNLKFGKEFTEAIEKKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAQLIGQA- 236

  Fly   395 EVIGDSPAALQLRYLQTLNTI--SAEKNSTIVFPLPIDLI 432
              |.::.|.:.||.::....|  :..|::..|:....||:
plant   237 --IANNEAFITLRKIEAAREIAQTIAKSANKVYLNSSDLL 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42540NP_001246627.1 SPFH_stomatin 229..430 CDD:259801 45/220 (20%)
PHB7NP_199227.1 SPFH_prohibitin 36..230 CDD:259799 40/186 (22%)

Return to query results.
Submit another query.