Protein Alignment CG42540 and PHB3

DIOPT Version :10

• Sequence 1: NP_001246627.1
• Gene: CG42540 / 38562
• FlyBaseID: FBgn0260657
• Length: 517
• Species: Drosophila melanogaster
• Sequence 2: NP_198893.1
• Gene: PHB3 / 834077
• AraportID: AT5G40770
• Length: 277
• Species: Arabidopsis thaliana
• Alignment Length: 255
• Identity: 64/255 - (25%)
• Similarity: 106/255 - (41%)
• Gaps: 33/255 - (12%)

  Fly   184 STCGKLLIFLSVALVIMTLPFSLFVCFKVVQEYERAVIFRLGRLMQGGAKGPGIFFILPCIDSYA 248
            |...|....|..|..::..  |||    .|...||||||...|.:.....|.|..|::|.:....
plant    12 SNLAKAAFGLGTAATVLNT--SLF----TVDGGERAVIFDRFRGVMDQTVGEGTHFLIPILQRPH 70

  Fly   249 RVDLRTRTYDVPPQEVLTKDSVTVSVDAVVYYR--VSN-----ATVSIANVENAHHSTRLLAQTT 306
            ..|:||:.:....... |||...|::...|..|  ||.     .|:.:...|....|   :....
plant    71 IFDIRTKPHTFSSISG-TKDLQMVNLTLRVLSRPEVSRLPYIFQTLGLEYDEKVLPS---IGNEV 131

  Fly   307 LRNTMGTRHLHEILSERMTISGTMQVQLDEATDAWGIKVERVEIKDVRLPVQLQRAM----AAEA 367
            |:..:...:..::|:||..:|..::..|......:.|.::.|.|..:...|:..||:    .|:.
plant   132 LKAVVAQFNADQLLTERPHVSALVRESLITRAKDFNIVLDDVAITHLSYGVEFSRAVEQKQVAQQ 196

  Fly   368 EAAR----------EARAKVIAAEGEQKASRALREASEVIGDSPAALQLRYLQTLNTISA 417
            ||.|          |.||.||.||||.:|::.:.:|:...|  ...::||.::....|::
plant   197 EAERSKFVVMKADQERRAAVIRAEGESEAAQLISDATAKAG--MGLIELRRIEASREIAS 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42540	NP_001246627.1	SPFH_stomatin	229..430	CDD:259801	49/210 (23%)
PHB3	NP_198893.1	SPFH_prohibitin	32..226	CDD:259799	53/201 (26%)
		vATP-synt_E	213..>253	CDD:419987	13/41 (32%)