DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42540 and AT4G27580

DIOPT Version :10

Sequence 1:NP_001246627.1 Gene:CG42540 / 38562 FlyBaseID:FBgn0260657 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_567777.1 Gene:AT4G27580 / 828867 AraportID:AT4G27580 Length:104 Species:Arabidopsis thaliana


Alignment Length:85 Identity:20/85 - (23%)
Similarity:35/85 - (41%) Gaps:3/85 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 VQLQRAMAAEAEAAREARAKVIAAEGEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNS 421
            |..:.|:.....||.|..| .:..|.::::....::..|...||..|.:..  .|...:.||:.:
plant    18 VSTENAVVESKNAATETDA-TLTQEKKEESIEETKKEGETKEDSSEATKAE--PTPEAVKAEEKT 79

  Fly   422 TIVFPLPIDLITYFLKTNEA 441
            :.....|....|...||:||
plant    80 SSETEPPAQETTPAAKTDEA 99

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42540NP_001246627.1 SPFH_stomatin 229..430 CDD:259801 15/72 (21%)
AT4G27580NP_567777.1 LGT <2..98 CDD:469786 18/82 (22%)

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