Protein Alignment CG42540 and stom

DIOPT Version :10

• Sequence 1: NP_001246627.1
• Gene: CG42540 / 38562
• FlyBaseID: FBgn0260657
• Length: 517
• Species: Drosophila melanogaster
• Sequence 2: XP_017208322.1
• Gene: stom / 81534
• ZFINID: ZDB-GENE-980526-486
• Length: 305
• Species: Danio rerio
• Alignment Length: 316
• Identity: 191/316 - (60%)
• Similarity: 248/316 - (78%)
• Gaps: 12/316 - (3%)

  Fly   122 MQQPQQQQQMQQPQQQLPHSHHALMQQSQQQQAIHRAEARRDTQAKHSHGFLYSDEEISDKASTC 186
            |:..::...|::.:::.......|..::.:.|..|..:   |:||..:     :|.:|    ..|
Zfish     1 MEDGRETAAMREEERRKRQIDSELSSRNNKDQWCHTVD---DSQALEN-----TDSDI----GLC 53

  Fly   187 GKLLIFLSVALVIMTLPFSLFVCFKVVQEYERAVIFRLGRLMQGGAKGPGIFFILPCIDSYARVD 251
            |.:|:..|:.|.::|||.|:::|.|:|:|||||:||||||:::|||||||:||||||.||:..||
Zfish    54 GWILVIFSILLTLLTLPLSIWMCIKIVKEYERAIIFRLGRILRGGAKGPGLFFILPCTDSFINVD 118

  Fly   252 LRTRTYDVPPQEVLTKDSVTVSVDAVVYYRVSNATVSIANVENAHHSTRLLAQTTLRNTMGTRHL 316
            :||.|:|:||||||||||||||||.||||||.|||:::||:.||..:|||||||||||.:||::|
Zfish   119 MRTITFDIPPQEVLTKDSVTVSVDGVVYYRVQNATLAVANITNADAATRLLAQTTLRNVLGTKNL 183

  Fly   317 HEILSERMTISGTMQVQLDEATDAWGIKVERVEIKDVRLPVQLQRAMAAEAEAAREARAKVIAAE 381
            .||||:|..|:.:||..||:|||.|||||||||||||:||:||||||||||||:|||||||||||
Zfish   184 AEILSDREEIAHSMQSTLDDATDDWGIKVERVEIKDVKLPLQLQRAMAAEAEASREARAKVIAAE 248

  Fly   382 GEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLITYFLK 437
            ||..|||||:|||.||.:||:|||||||||||||:|||||||:||||||::..|||
Zfish   249 GEMNASRALKEASLVIAESPSALQLRYLQTLNTIAAEKNSTIIFPLPIDMMQSFLK 304

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42540	NP_001246627.1	SPFH_stomatin	229..430	CDD:259801	153/200 (77%)
stom	XP_017208322.1	SPFH_stomatin	96..297	CDD:259801	153/200 (77%)