Protein Alignment CG42540 and Phb1

DIOPT Version :10

• Sequence 1: NP_001246627.1
• Gene: CG42540 / 38562
• FlyBaseID: FBgn0260657
• Length: 517
• Species: Drosophila melanogaster
• Sequence 2: NP_476607.2
• Gene: Phb1 / 49168
• FlyBaseID: FBgn0002031
• Length: 276
• Species: Drosophila melanogaster
• Alignment Length: 224
• Identity: 50/224 - (22%)
• Similarity: 101/224 - (45%)
• Gaps: 25/224 - (11%)

  Fly   213 VQEYERAVIFRLGRLMQGGAKGPGIFFILPCIDSYARVDLRTRTYDVPPQEVLT--KDSVTVSVD 275
            |:...|||||.....::....|.|..|.:|.:......|:|::..:||   |:|  ||...|::.
  Fly    30 VEGGHRAVIFDRFTGIKENVVGEGTHFFIPWVQRPIIFDIRSQPRNVP---VITGSKDLQNVNIT 91

  Fly   276 AVVYYR-VSNATVSIANVENAHHSTRLL---AQTTLRNTMGTRHLHEILSERMTISGTMQVQLDE 336
            ..:.|| :.:....|..:....:..|:|   |...|:..:......|::::|..:|..:..:|..
  Fly    92 LRILYRPIPDQLPKIYTILGQDYDERVLPSIAPEVLKAVVAQFDAGELITQREMVSQRVSQELTV 156

  Fly   337 ATDAWGIKVERVEI------KDVRLPVQLQRAMAAEAEAAR--------EARAKVIAAEGEQKAS 387
            ....:|..::.:.:      ::..|.|::::....|||.||        :..|.:|:|||:.:|:
  Fly   157 RAKQFGFILDDISLTHLTFGREFTLAVEMKQVAQQEAEKARFVVEKAEQQKLASIISAEGDAEAA 221

  Fly   388 RALREASEVIGDSPAALQLRYLQTLNTIS 416
            ..|.::....||  ..::||.::....|:
  Fly   222 GLLAKSFGEAGD--GLVELRRIEAAEDIA 248

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42540	NP_001246627.1	SPFH_stomatin	229..430	CDD:259801	44/208 (21%)
Phb1	NP_476607.2	SPFH_prohibitin	27..221	CDD:259799	43/193 (22%)