Protein Alignment CG42540 and Mec2

DIOPT Version :10

• Sequence 1: NP_001246627.1
• Gene: CG42540 / 38562
• FlyBaseID: FBgn0260657
• Length: 517
• Species: Drosophila melanogaster
• Sequence 2: NP_573357.1
• Gene: Mec2 / 32905
• FlyBaseID: FBgn0030993
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 298
• Identity: 179/298 - (60%)
• Similarity: 229/298 - (76%)
• Gaps: 18/298 - (6%)

  Fly   171 GFLYSDEEISDKASTCGKLLIFL-SVALVIMTLPFSLFVCFKVVQEYERAVIFRLGRLMQGGAKG 234
            ||..|:.|    ...|.:.::.| ||.:.|:|.|.::|:|||||.|||||:||||||| .|||:|
  Fly    53 GFKTSENE----PKGCMEWVVTLFSVLIFIITSPIAIFICFKVVAEYERAIIFRLGRL-SGGARG 112

  Fly   235 PGIFFILPCIDSYARVDLRTRTYDVPPQEVLTKDSVTVSVDAVVYYRVSNATVSIANVENAHHST 299
            ||:||||||||.|.:|||||.|::||.||:||||||||:||||||||:|:...::..||:...||
  Fly   113 PGMFFILPCIDEYRKVDLRTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLYAVIQVEDYSMST 177

  Fly   300 RLLAQTTLRNTMGTRHLHEILSERMTISGTMQVQLDEATDAWGIKVERVEIKDVRLPVQLQRAMA 364
            ||||.|||||.:|||:|.|:|:||.|::..||..|||||:.||:.|||||||||.|||.:|||||
  Fly   178 RLLAATTLRNIVGTRNLSELLTERETLAHNMQATLDEATEPWGVMVERVEIKDVSLPVSMQRAMA 242

  Fly   365 AEAEAAREARAKVIAAEGEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPI 429
            |||||||:|||||||||||:|::.||:|||:||..||:||||||||||::|||||||||:||||:
  Fly   243 AEAEAARDARAKVIAAEGEKKSATALKEASDVISASPSALQLRYLQTLSSISAEKNSTIIFPLPM 307

  Fly   430 DLITYFLKTNEATTQQNARAAAAAIGNTPPPLQLAPQQ 467
            :|:|.:|            |..|.:...||.|:.:|::
  Fly   308 ELLTPYL------------AKYAHLMGPPPELKQSPEK 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42540	NP_001246627.1	SPFH_stomatin	229..430	CDD:259801	141/200 (71%)
Mec2	NP_573357.1	SPFH_like	107..314	CDD:473137	143/206 (69%)