DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42540 and STOML2

DIOPT Version :9

Sequence 1:NP_001246627.1 Gene:CG42540 / 38562 FlyBaseID:FBgn0260657 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_038470.1 Gene:STOML2 / 30968 HGNCID:14559 Length:356 Species:Homo sapiens


Alignment Length:317 Identity:82/317 - (25%)
Similarity:146/317 - (46%) Gaps:68/317 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 AEARRDTQAKHSHGFLYSDEEISDKASTCGKLLIFLSVALVIMTLPFSLFVCFKVVQEYERAVIF 222
            |.|.|.|.|....|.|.:......:||:               .||.:..|.|  |.:.|..|:.
Human     3 ARAARGTGALLLRGSLLASGRAPRRASS---------------GLPRNTVVLF--VPQQEAWVVE 50

  Fly   223 RLGRLMQGGAKGPGIFFILPCIDSYARV-DLRTRTYDVPPQEVLTKDSVTVSVDAVVYYRVSNAT 286
            |:||..:  ...||:..::|.:|....| .|:....:||.|..:|.|:||:.:|.|:|.|:.:..
Human    51 RMGRFHR--ILEPGLNILIPVLDRIRYVQSLKEIVINVPEQSAVTLDNVTLQIDGVLYLRIMDPY 113

  Fly   287 VSIANVENAHHSTRLLAQTTLRNTMGTRHLHEILSERMTISGTMQVQLDEATDAWGIKVERVEIK 351
            .:...||:..::...|||||:|:.:|...|.::..||.:::.::...:::|.|.|||:..|.|||
Human   114 KASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNASIVDAINQAADCWGIRCLRYEIK 178

  Fly   352 DVRLPVQLQRAMAAEAEAAREARAKVIAAEGEQKA------------------------SRALRE 392
            |:.:|.:::.:|..:.||.|..||.|:.:||.:::                        ::|..|
Human   179 DIHVPPRVKESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGE 243

  Fly   393 ASEVI---------------------GDSPAALQL--RYLQTLNTISAEKNSTIVFP 426
            ||.|:                     ||:.|:|.:  :|:...:.::.:.| ||:.|
Human   244 ASAVLAKAKAKAEAIRILAAALTQHNGDAAASLTVAEQYVSAFSKLAKDSN-TILLP 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42540NP_001246627.1 HflC 188..440 CDD:223407 73/287 (25%)
SPFH_stomatin 229..430 CDD:259801 63/246 (26%)
STOML2NP_038470.1 HflC 41..314 CDD:223407 69/262 (26%)
SPFH_paraslipin 74..184 CDD:259811 35/109 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 321..356
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0330
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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