DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42540 and sto-5

DIOPT Version :9

Sequence 1:NP_001246627.1 Gene:CG42540 / 38562 FlyBaseID:FBgn0260657 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_001379952.1 Gene:sto-5 / 181730 WormBaseID:WBGene00006067 Length:381 Species:Caenorhabditis elegans


Alignment Length:306 Identity:156/306 - (50%)
Similarity:210/306 - (68%) Gaps:25/306 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 PHSHHAL----MQQSQQQQAI---HRAEARRDTQAKHSHGFLYSDEEISDKASTCGKLLIFLSVA 196
            ||...|:    |:...|...|   |.....|:.....||                  :::..|..
 Worm    88 PHKRDAIEKIPMRARSQSWLIRTRHLLHEEREPPPLISH------------------MMLIFSFL 134

  Fly   197 LVIMTLPFSLFVCFKVVQEYERAVIFRLGRLMQGGAKGPGIFFILPCIDSYARVDLRTRTYDVPP 261
            |::::.|:.||.|.|||:||:||||||||||::||.||||:||:|||||:...||||..::||||
 Worm   135 LILLSFPWCLFFCVKVVKEYQRAVIFRLGRLIKGGTKGPGLFFVLPCIDTMKIVDLRVLSFDVPP 199

  Fly   262 QEVLTKDSVTVSVDAVVYYRVSNATVSIANVENAHHSTRLLAQTTLRNTMGTRHLHEILSERMTI 326
            ||:|::|||||||:||:|:||||..:|:.||.:|..||||||||||||.:||:.|.|:||||..|
 Worm   200 QEILSRDSVTVSVEAVIYFRVSNPVISVTNVNDAQFSTRLLAQTTLRNVLGTKTLSEMLSERDAI 264

  Fly   327 SGTMQVQLDEATDAWGIKVERVEIKDVRLPVQLQRAMAAEAEAAREARAKVIAAEGEQKASRALR 391
            :...:..|||.||.||:|||||||||:|||.||.|:|||||||.|.|||.:|||:||:.||.:|:
 Worm   265 ASISEKVLDEGTDPWGVKVERVEIKDIRLPHQLMRSMAAEAEAVRRARAAIIAAQGEKDASESLQ 329

  Fly   392 EASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLITYFLK 437
            .|::.|..:...:||||||||..|||::|:|||.|.||::..:::|
 Worm   330 TAADTIAQNKMTIQLRYLQTLTKISAQRNNTIVMPYPIEVAKHYMK 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42540NP_001246627.1 HflC 188..440 CDD:223407 146/250 (58%)
SPFH_stomatin 229..430 CDD:259801 123/200 (62%)
sto-5NP_001379952.1 SPFH_like 167..368 CDD:418525 123/200 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062075at2759
OrthoFinder 1 1.000 - - FOG0000760
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10264
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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