Protein Alignment CG42540 and sto-5

DIOPT Version :10

• Sequence 1: NP_001246627.1
• Gene: CG42540 / 38562
• FlyBaseID: FBgn0260657
• Length: 517
• Species: Drosophila melanogaster
• Sequence 2: NP_001379952.1
• Gene: sto-5 / 181730
• WormBaseID: WBGene00006067
• Length: 381
• Species: Caenorhabditis elegans
• Alignment Length: 306
• Identity: 156/306 - (50%)
• Similarity: 210/306 - (68%)
• Gaps: 25/306 - (8%)

  Fly   139 PHSHHAL----MQQSQQQQAI---HRAEARRDTQAKHSHGFLYSDEEISDKASTCGKLLIFLSVA 196
            ||...|:    |:...|...|   |.....|:.....||                  :::..|..
 Worm    88 PHKRDAIEKIPMRARSQSWLIRTRHLLHEEREPPPLISH------------------MMLIFSFL 134

  Fly   197 LVIMTLPFSLFVCFKVVQEYERAVIFRLGRLMQGGAKGPGIFFILPCIDSYARVDLRTRTYDVPP 261
            |::::.|:.||.|.|||:||:||||||||||::||.||||:||:|||||:...||||..::||||
 Worm   135 LILLSFPWCLFFCVKVVKEYQRAVIFRLGRLIKGGTKGPGLFFVLPCIDTMKIVDLRVLSFDVPP 199

  Fly   262 QEVLTKDSVTVSVDAVVYYRVSNATVSIANVENAHHSTRLLAQTTLRNTMGTRHLHEILSERMTI 326
            ||:|::|||||||:||:|:||||..:|:.||.:|..||||||||||||.:||:.|.|:||||..|
 Worm   200 QEILSRDSVTVSVEAVIYFRVSNPVISVTNVNDAQFSTRLLAQTTLRNVLGTKTLSEMLSERDAI 264

  Fly   327 SGTMQVQLDEATDAWGIKVERVEIKDVRLPVQLQRAMAAEAEAAREARAKVIAAEGEQKASRALR 391
            :...:..|||.||.||:|||||||||:|||.||.|:|||||||.|.|||.:|||:||:.||.:|:
 Worm   265 ASISEKVLDEGTDPWGVKVERVEIKDIRLPHQLMRSMAAEAEAVRRARAAIIAAQGEKDASESLQ 329

  Fly   392 EASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLITYFLK 437
            .|::.|..:...:||||||||..|||::|:|||.|.||::..:::|
 Worm   330 TAADTIAQNKMTIQLRYLQTLTKISAQRNNTIVMPYPIEVAKHYMK 375

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42540	NP_001246627.1	SPFH_stomatin	229..430	CDD:259801	123/200 (62%)
sto-5	NP_001379952.1	SPFH_like	167..368	CDD:473137	123/200 (62%)