Protein Alignment CG42540 and sto-4

DIOPT Version :10

• Sequence 1: NP_001246627.1
• Gene: CG42540 / 38562
• FlyBaseID: FBgn0260657
• Length: 517
• Species: Drosophila melanogaster
• Sequence 2: NP_509944.1
• Gene: sto-4 / 181350
• WormBaseID: WBGene00006066
• Length: 281
• Species: Caenorhabditis elegans
• Alignment Length: 293
• Identity: 183/293 - (62%)
• Similarity: 225/293 - (76%)
• Gaps: 15/293 - (5%)

  Fly   151 QQQAIHRAEARR--DTQAKHSHGFLYSDEEISDKASTCGKLLIFLSVALVIMTLPFSLFVCFKVV 213
            |:|...||...|  |...|.::             :.||.::..:|..:|:.|||.|.|.|.|||
 Worm     2 QRQGTVRAPCSRIVDPHQKVNY-------------TVCGWIITIISYLVVLFTLPLSAFFCLKVV 53

  Fly   214 QEYERAVIFRLGRLMQGGAKGPGIFFILPCIDSYARVDLRTRTYDVPPQEVLTKDSVTVSVDAVV 278
            ||||||||||||||..|||:|||||||:|||:|:.::|||..::||||||:|:|||||||||||:
 Worm    54 QEYERAVIFRLGRLKHGGARGPGIFFIIPCIESFKKIDLRVVSFDVPPQEILSKDSVTVSVDAVI 118

  Fly   279 YYRVSNATVSIANVENAHHSTRLLAQTTLRNTMGTRHLHEILSERMTISGTMQVQLDEATDAWGI 343
            |:|:||||||:.|||:|..||:|||||||||.:|||.|.|:||.|..||..||..||||||.||:
 Worm   119 YFRISNATVSVINVEDAARSTKLLAQTTLRNFLGTRTLAEMLSSRDAISMQMQAALDEATDPWGV 183

  Fly   344 KVERVEIKDVRLPVQLQRAMAAEAEAAREARAKVIAAEGEQKASRALREASEVIGDSPAALQLRY 408
            |||||||||||||:||||||||||||||.|.||:|||||||.|||||.:|::||..||.|:||||
 Worm   184 KVERVEIKDVRLPIQLQRAMAAEAEAARAAGAKIIAAEGEQLASRALADAADVIATSPCAIQLRY 248

  Fly   409 LQTLNTISAEKNSTIVFPLPIDLITYFLKTNEA 441
            |||||:||:|||:||:||.|.:||..|:::..|
 Worm   249 LQTLNSISSEKNNTIIFPFPTELIAKFIQSAAA 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42540	NP_001246627.1	SPFH_stomatin	229..430	CDD:259801	145/200 (73%)
sto-4	NP_509944.1	SPFH_like	70..270	CDD:473137	145/199 (73%)