DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42540 and unc-1

DIOPT Version :9

Sequence 1:NP_001246627.1 Gene:CG42540 / 38562 FlyBaseID:FBgn0260657 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_001123162.1 Gene:unc-1 / 180458 WormBaseID:WBGene00006741 Length:289 Species:Caenorhabditis elegans


Alignment Length:270 Identity:162/270 - (60%)
Similarity:214/270 - (79%) Gaps:4/270 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 SDEEISDKASTCGKL----LIFLSVALVIMTLPFSLFVCFKVVQEYERAVIFRLGRLMQGGAKGP 235
            |.:::.....|.|.:    |..||..|:|:|.|||:.||.||::||||.||||:|||:.|||:||
 Worm    20 SQQDVPPDYETIGTIFGYALQALSWILIIVTFPFSMCVCLKVIKEYERVVIFRIGRLVFGGARGP 84

  Fly   236 GIFFILPCIDSYARVDLRTRTYDVPPQEVLTKDSVTVSVDAVVYYRVSNATVSIANVENAHHSTR 300
            |:.||:||||:|.::|||..:|.|||||:|:|||||||||||||:|.|:...|:.||::|.:||:
 Worm    85 GMIFIIPCIDTYRKIDLRVVSYAVPPQEILSKDSVTVSVDAVVYFRTSDPIASVNNVDDAIYSTK 149

  Fly   301 LLAQTTLRNTMGTRHLHEILSERMTISGTMQVQLDEATDAWGIKVERVEIKDVRLPVQLQRAMAA 365
            |||||||||.:|.:.|.|:|:||..|:...:..|||.|:.||:||||||:||:|||.||.|||||
 Worm   150 LLAQTTLRNALGMKTLTEMLTEREAIAQLCETILDEGTEHWGVKVERVEVKDIRLPQQLTRAMAA 214

  Fly   366 EAEAAREARAKVIAAEGEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPID 430
            ||||||||||||:||||||||||||:||::||..:|.|||||:||.||:|:||.|||||||:|::
 Worm   215 EAEAAREARAKVVAAEGEQKASRALKEAADVIQANPVALQLRHLQALNSIAAEHNSTIVFPVPVE 279

  Fly   431 LITYFLKTNE 440
            :...|:|.::
 Worm   280 MFGAFMKKDQ 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42540NP_001246627.1 HflC 188..440 CDD:223407 159/255 (62%)
SPFH_stomatin 229..430 CDD:259801 133/200 (67%)
unc-1NP_001123162.1 SPFH_like 79..279 CDD:388510 133/199 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062075at2759
OrthoFinder 1 1.000 - - FOG0000760
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100539
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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