Protein Alignment CG42540 and phb-1

DIOPT Version :10

• Sequence 1: NP_001246627.1
• Gene: CG42540 / 38562
• FlyBaseID: FBgn0260657
• Length: 517
• Species: Drosophila melanogaster
• Sequence 2: NP_490929.1
• Gene: phb-1 / 171768
• WormBaseID: WBGene00004014
• Length: 275
• Species: Caenorhabditis elegans
• Alignment Length: 240
• Identity: 58/240 - (24%)
• Similarity: 107/240 - (44%)
• Gaps: 40/240 - (16%)

  Fly   217 ERAVIFRLGRLMQGGAKGPGIFFILPCIDSYARVDLRTRTYDVPPQEVLT----KDSVTVSVDAV 277
            :|||||.....::....|.|..|::|.:......|:|:     .|:.|.|    ||...|::...
 Worm    37 QRAVIFDRFSGVKNEVVGEGTHFLIPWVQKPIIFDIRS-----TPRAVTTITGSKDLQNVNITLR 96

  Fly   278 VYYRVS-----NATVSIANVENAHHSTRLLAQTT---LRNTMGTRHLHEILSERMTISGTMQVQL 334
            :.:|.|     |..::|    ...::.|:|...|   |:..:.....||::::|..:|....|.|
 Worm    97 ILHRPSPDRLPNIYLNI----GLDYAERVLPSITNEVLKAVVAQFDAHEMITQREVVSQRASVAL 157

  Fly   335 DEATDAWGIKVERVEI------KDVRLPVQLQRAMAAEAEAAR----EAR----AKVIAAEGEQK 385
            .|....:|:.::.:.|      ::....|::::....|||.||    :|.    |.|..|||:.:
 Worm   158 RERAAQFGLLLDDIAITHLNFGREFTEAVEMKQVAQQEAEKARYLVEKAEQMKIAAVTTAEGDAQ 222

  Fly   386 ASRALREASEVIGDSPAALQLRYLQTLNTISAE--KNSTIVFPLP 428
            |::.|.:|....||  ..::||.::....|:..  ||..:.: ||
 Worm   223 AAKLLAKAFASAGD--GLVELRKIEAAEEIAERMAKNKNVTY-LP 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42540	NP_001246627.1	SPFH_stomatin	229..430	CDD:259801	53/228 (23%)
phb-1	NP_490929.1	SPFH_prohibitin	30..220	CDD:259799	45/191 (24%)