DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42540 and Phb2

DIOPT Version :10

Sequence 1:NP_001246627.1 Gene:CG42540 / 38562 FlyBaseID:FBgn0260657 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_061518221.1 Gene:Phb2 / 1279019 VectorBaseID:AGAMI1_014151 Length:363 Species:Anopheles gambiae


Alignment Length:349 Identity:68/349 - (19%)
Similarity:146/349 - (41%) Gaps:53/349 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 SDEEISDKASTCGK-----LLIFLSVALVIMTLPFSLFVCFKVVQEYERAVIF-RLGRLMQGGAK 233
            :..:::|.|...||     |...|.|...:....:.:......|:...||:|| |:|. :.....
Mosquito     2 AQSKLNDLAGKFGKGGPPGLTTGLKVLAAVGAAAYGIKNSMYTVEGGHRAIIFNRIGG-VGDDVF 65

  Fly   234 GPGIFFILPCIDSYARVDLRTRTYDVPPQEVL----TKDSVTVSVDAVVYYRVSNATVSIANVE- 293
            ..|:.|.:|........|:|:|     |:::.    :||...|::...|..|.....:.:...: 
Mosquito    66 SEGLHFRVPWFQYPIIYDIRSR-----PRKISSPTGSKDLQMVNISLRVLSRPDARKLPVMYRQL 125

  Fly   294 NAHHSTRLL---AQTTLRNTMGTRHLHEILSERMTISGTMQVQLDEATDAWGIKVERVEI----- 350
            ...:..::|   ....|::.:...:..:::::|..:|..::.:|.|....:.|.::.|.:     
Mosquito   126 GQDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSF 190

  Fly   351 -KDVRLPVQLQRAMAAEAE--------AAREARAKVIAAEGEQKASRALREASEVIGDSPAALQL 406
             ::....|:.::....||:        |.:|.:.|::.||||.:|::.|..|   :.::|..|:|
Mosquito   191 GREYTAAVESKQVAQQEAQQAAFLVERAKQERQQKIVQAEGEAEAAKMLGIA---VAENPGYLKL 252

  Fly   407 RYLQT----LNTISAEKN----STIVFPLPIDLITYFLKTNEATTQQNA------RAAAAAIGNT 457
            |.::.    ..||:..:|    |.....|.|...|:...:.:.:|:|..      .:||.|..::
Mosquito   253 RKIRAAQNIARTIANSQNRVYLSANSLMLNIQDDTFDDMSKKVSTRQPGSNGWFNSSAAPATTSS 317

  Fly   458 PPPLQLAPQ--QQMGQQQQPQYQQ 479
            |...|:...  ::.|:.|....:|
Mosquito   318 PATGQVKTNSTRRAGEAQTEDNKQ 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42540NP_001246627.1 SPFH_stomatin 229..430 CDD:259801 42/230 (18%)
Phb2XP_061518221.1 None

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