DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42540 and Stoml2

DIOPT Version :10

Sequence 1:NP_001246627.1 Gene:CG42540 / 38562 FlyBaseID:FBgn0260657 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_307851.5 Gene:Stoml2 / 1269237 VectorBaseID:AGAMI1_012601 Length:391 Species:Anopheles gambiae


Alignment Length:302 Identity:76/302 - (25%)
Similarity:145/302 - (48%) Gaps:58/302 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 PFSLFVCFKVVQEYERAVIFRLG---RLMQGGAKGPGIFFILPCIDSYARV-DLRTRTYDVPPQE 263
            |.:..:.|  |.:.|..::.|:|   |:::     ||:..:||.:|....| .|:....|||.|.
Mosquito    48 PINTVIMF--VPQQEAWIVERMGKFHRILE-----PGLNVLLPVVDRVKYVQSLKEIAIDVPKQS 105

  Fly   264 VLTKDSVTVSVDAVVYYRVSNATVSIANVENAHHSTRLLAQTTLRNTMGTRHLHEILSERMTISG 328
            .:|.|:||:|:|.|:|.|:.:..::...||:...:...|||||:|:.:|...|.::..||.:::.
Mosquito   106 AITSDNVTLSIDGVLYLRILDPYLASYGVEDPEFAITQLAQTTMRSELGKMSLDKVFRERESLNI 170

  Fly   329 TMQVQLDEATDAWGIKVERVEIKDVRLPVQLQRAMAAEAEAAREARAKVIAAEG----------- 382
            ::...:::|::||||...|.||:|::||.::..||..:.||.|..||.::.:||           
Mosquito   171 SIVESINKASEAWGISCLRYEIRDIKLPSRVHEAMQMQVEAERRKRAAILESEGVRAADINVAEG 235

  Fly   383 -------------EQKASRALREASEVI---------------------GDSPAALQL--RYLQT 411
                         :::.:||..||:.::                     |.|.|:|.:  :|:..
Mosquito   236 KRQSRILASEAQKQEEINRANGEAAAIMALADARAKSLKIVAESLANEHGRSAASLSVAEKYVVA 300

  Fly   412 LNTISAEKNSTIVFPLPIDLITYFLKTNEATTQQNARAAAAA 453
            ...::...|:.||.....|:.:...:..:..:..:|.:.|||
Mosquito   301 FEKLAKHNNTLIVPSTASDVTSMVAQAMQIYSNLSASSRAAA 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42540NP_001246627.1 SPFH_stomatin 229..430 CDD:259801 64/248 (26%)
Stoml2XP_307851.5 None

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