DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11357 and AT2G25300

DIOPT Version :9

Sequence 1:NP_001097505.1 Gene:CG11357 / 38561 FlyBaseID:FBgn0035558 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_180102.3 Gene:AT2G25300 / 817068 AraportID:AT2G25300 Length:346 Species:Arabidopsis thaliana


Alignment Length:111 Identity:24/111 - (21%)
Similarity:47/111 - (42%) Gaps:24/111 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 AVRNIEKRRIIRETWANRSYIDQTPLKVYFLVGGVSAKSEKWQQFLGRENHLHGD-LIQGNFKDA 206
            |:|.:|:|.|:                :.|::|....:.:...:.:..||....| ||..|.::|
plant   148 ALRKLEERGIV----------------IRFVIGRSPNRGDSLDRKIDEENQARKDFLILENHEEA 196

  Fly   207 YRNMTYKHVMALKWFNEKCAH---AQLLVKVDDDVFMNTPQLVKYL 249
            ...:..|    :|:|......   |:..:||||::.::...|:..|
plant   197 QEELAKK----VKFFFSAAVQNWDAEFYIKVDDNIDLDLEGLIGLL 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11357NP_001097505.1 Galactosyl_T 148..347 CDD:304462 22/106 (21%)
AT2G25300NP_180102.3 DUF4094 30..103 CDD:290073
Galactosyl_T 134..329 CDD:304462 24/111 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 52 1.000 Inparanoid score I2616
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.