DRSC/TRiP Functional Genomics Resources

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Protein Alignment KRT8 and ifa-3

DIOPT Version :10

Sequence 1:NP_001243211.1 Gene:KRT8 / 3856 HGNCID:6446 Length:511 Species:Homo sapiens
Sequence 2:NP_510649.3 Gene:ifa-3 / 181699 WormBaseID:WBGene00002051 Length:581 Species:Caenorhabditis elegans


Alignment Length:533 Identity:113/533 - (21%)
Similarity:231/533 - (43%) Gaps:113/533 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    23 STPASTMSIRVTQKSYKVSTSGPRAFS--SRSYTSGPGSRISSSSFSRVGSSNFRGGLGGGYGGA 85
            |.||...::..:.::|....||.|...  :.::||...|.:|..                |.|.|
 Worm    13 SRPAFNRTVTSSTQNYGTPASGNRVLKIVTETHTSSVASGLSPY----------------GQGAA 61

Human    86 SGMGGITAVTVNQSLLSPLVLEVDPNIQAVRTQEKEQIKTLNNKFASFIDKVRFLEQQNKMLETK 150
            |                        .|:..|.:||::|..||::.||:|.|||||..||:.||..
 Worm    62 S------------------------TIRDDREREKKEITELNDRLASYIGKVRFLAAQNRKLEAD 102

Human   151 WSLLQQQ-KTARSNMDNMFESYINNLRRQLETLGQEKLKLEAELGNMQGLVEDFKNKYED----- 209
            .::||.: ..:..::..|:|..|......::..|::..:.|.|:|.::..:::.:.|:|:     
 Worm   103 LNVLQSRFGKSTGSVKIMYEMEITTATNVVKETGKDHEEAEKEIGKIKDQLDELRKKFEEAQKGR 167

Human   210 -------------------EIN-------------KRTEMEN-----EFVLIKKDVDEAYMNKVE 237
                               |||             .|.:.||     |...::.::|:..:.:::
 Worm   168 AEDRLKIDELLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVRSELDQETLLRID 232

Human   238 LESRLEGLTDEINFLRQLYEEEIRELQSQISDTSVVLSMDNSRSLDMDSIIAEVKAQYEDIANRS 302
            .::::..:.:||:|:::.:|.|:::||:|.:..:...:.:..::..|:| |.:::|:|:.....:
 Worm   233 NQNKVTTILEEIDFMKRGFETELKDLQAQAARDTTSENREYFKNELMNS-IRDIRAEYDRFMAGN 296

Human   303 RAEAESMYQIKYEELQSLAGKHGDDLRRTKTEISEMNRNISRLQAEIEGLKGQRASLEAAIADAE 367
            |.:.||..||:.:|:.:...:...::...:.|:..::..:|.|:::...|..:...||..:.|..
 Worm   297 RNDLESWSQIRVQEINTQTNRQNAEINHKRDEVKRLHSQVSELKSKHAELAARNGLLEKQLEDLN 361

Human   368 QRGELAIKDANAKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 432
            .:.|...:...|.|::.:|.:::.:::....|.|.|.|::.|..||.|:..||::|||...  |:
 Worm   362 YQLEDDQRSYEAALNDKDAQVRKLREECQALLVELQMLLDTKQTLDGELKVYRRMLEGNSE--EN 424

Human   433 GMQ------------NMSIHTKTTSGYAGGLSSAYGGLTSPGLSYSLGSSFGSGAGSSSFSRTSS 485
            |::            |..:.|:|.....|..||.        .||.     .|..|:.|....|.
 Worm   425 GLRQLVEKVVRTSAINEEVDTETMRVVKGEHSSR--------TSYQ-----RSAKGNVSIKEVSP 476

Human   486 SRAVVVKKIETRD 498
            ....|:.:...||
 Worm   477 EGKFVILENTHRD 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KRT8NP_001243211.1 Keratin_2_head <91..115 CDD:465068 1/23 (4%)
Filament 118..429 CDD:459643 79/353 (22%)
ifa-3NP_510649.3 solA <15..>86 CDD:236887 23/110 (21%)
Filament 71..419 CDD:459643 77/348 (22%)
LTD 464..570 CDD:460003 7/26 (27%)

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