DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tie and Fgfr3

DIOPT Version :10

Sequence 1:NP_523928.1 Gene:Tie / 38559 FlyBaseID:FBgn0014073 Length:1233 Species:Drosophila melanogaster
Sequence 2:XP_006251454.1 Gene:Fgfr3 / 84489 RGDID:620714 Length:803 Species:Rattus norvegicus


Alignment Length:399 Identity:120/399 - (30%)
Similarity:183/399 - (45%) Gaps:102/399 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   848 DFERSNIRLKSLLGEGNFGQVWKAEADDLSGHFGATRI-VAVKTIRACSAQVSLKD---EANIMR 908
            :..|:.:.|...||||.||||..|||..:.....|..: ||||.::..:....|.|   |..:|:
  Rat   463 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDRTAKPVTVAVKMLKDDATDKDLSDLVSEMEMMK 527

  Fly   909 KLGSHQNVVTLLGACVESEPHMLIMEYAMRGRLLSLLRAARSATNILPASVPGGRSLA------- 966
            .:|.|:|::.|||||.:..|..:::|||.:|.|...|||.|          |.|...:       
  Rat   528 MIGKHKNIINLLGACTQGGPLYVLVEYAAKGNLREFLRARR----------PPGMDYSFDACRLP 582

  Fly   967 --PLSPRTLAGFALDIACGMEYIAGRRIVHRDLAARNVLLDHNGMCKICDFGMSIDLDAERMRKE 1029
              .|:.:.|...|..:|.||||:|.::.:||||||||||:..:.:.||.|||::.|:        
  Rat   583 EEQLTCKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDV-------- 639

  Fly  1030 QEKNAANDLMRHNAHKFKFDFGSRYILQHWQHTFGQGQGQGHCSKDQPHGEKKSHHGHDTIGKRH 1094
                       ||...:                                  ||:.:|.       
  Rat   640 -----------HNLDYY----------------------------------KKTTNGR------- 652

  Fly  1095 ALPIRWMAPESLQYHMFTTETDIWAFGIVLWEIATLGSTPYSQLTGREVIRRVPQGLRPDLPKES 1159
             ||::|||||:|...::|.::|:|:||::||||.|||.:||..:...|:.:.:.:|.|.|.|...
  Rat   653 -LPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 716

  Fly  1160 RHEFYNLMSRCWHKEPHMRPSFAQ-----SRLEITRSLHKWVD-------------DDSAASDYM 1206
            .|:.|.:|..|||..|..||:|.|     .|:....|..:::|             |..::|...
  Rat   717 THDLYMIMRECWHAVPSQRPTFKQLVEDLDRILTVTSTDEYLDLSVPFEQYSPGGQDTPSSSSSG 781

  Fly  1207 DVSGFSEDL 1215
            |.|.|:.||
  Rat   782 DDSVFTHDL 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TieNP_523928.1 TyrKc 854..1183 CDD:197581 108/341 (32%)
Fgfr3XP_006251454.1 IG_like 52..123 CDD:214653
Ig strand B 55..59 CDD:409358
Ig strand C 69..73 CDD:409358
Ig strand E 91..94 CDD:409358
Ig strand F 104..108 CDD:409358
IgI_2_FGFR 145..239 CDD:409443
Ig strand A 145..148 CDD:409443
Ig strand A' 156..161 CDD:409443
Ig strand B 165..173 CDD:409443
Ig strand C 179..184 CDD:409443
Ig strand C' 187..189 CDD:409443
Ig strand D 198..201 CDD:409443
Ig strand E 205..210 CDD:409443
Ig strand F 219..226 CDD:409443
Ig strand G 229..239 CDD:409443
IgI_3_FGFR 247..347 CDD:409363
Ig strand A 247..250 CDD:409363
Ig strand A' 254..258 CDD:409363
Ig strand B 266..273 CDD:409363
Ig strand C 277..284 CDD:409363
Ig strand D 299..304 CDD:409363
Ig strand E 315..320 CDD:409363
Ig strand F 328..336 CDD:409363
Ig strand G 339..347 CDD:409363
PTKc_FGFR3 456..789 CDD:173652 118/396 (30%)
Blue background indicates that the domain is not in the aligned region.

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