DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tie and Fgfr1

DIOPT Version :9

Sequence 1:NP_523928.1 Gene:Tie / 38559 FlyBaseID:FBgn0014073 Length:1233 Species:Drosophila melanogaster
Sequence 2:NP_077060.1 Gene:Fgfr1 / 79114 RGDID:620713 Length:822 Species:Rattus norvegicus


Alignment Length:895 Identity:200/895 - (22%)
Similarity:332/895 - (37%) Gaps:259/895 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   430 TAAPPP-----AAPPAPPVS--------------RTRYVGSGRPTAGLSDSIQDLKQTESEVAKP 475
            ||.|.|     |.|...||.              |.|.....:....|.|.:|..:...:.:...
  Rat    20 TARPAPTLPEQAQPWGVPVEVESLLVHPGDLLQLRCRLRDDVQSINWLRDGVQLAESNRTRITGE 84

  Fly   476 VVRRVVQKVSPSSSTPLIITVLSAEEETT---VGQTEALPTDESTTTTSTTTTTEKPSTTTSTST 537
            .| .|...:...|.....:|...:..:||   |..::|||:.|.......:::.||.:..|..:.
  Rat    85 EV-EVRDSIPADSGLYACVTNSPSGSDTTYFSVNVSDALPSSEDDDDDDDSSSEEKETDNTKPNR 148

  Fly   538 TTTTPV---PSTSKRTTTNAPLSTTNTPTTTTSSTTPSTT------------------------T 575
            ....|.   |...::.....|.:.| ......||.|||.|                        |
  Rat   149 RPVAPYWTSPEKMEKKLHAVPAAKT-VKFKCPSSGTPSPTLRWLKNGKEFKPDHRIGGYKVRYAT 212

  Fly   576 TSSTSTTVIPTTTKAN------------------SIIEKD--KELIRALGPALTREINIDDANNL 620
            .|....:|:| :.|.|                  .::|:.  :.:::|..|| .:.:.:  .:|:
  Rat   213 WSIIMDSVVP-SDKGNYTCIVENEYGSINHTYQLDVVERSPHRPILQAGLPA-NKTVAL--GSNV 273

  Fly   621 IVFCNNTSDCGVTPRTQTQ-PSHT--------TDSSP--KILRTTVLTSI---RSTVHPRPTSTS 671
            ...|...||    |:...| ..|.        .|:.|  :||:|..:.:.   ...:|.|..|..
  Rat   274 EFMCKVYSD----PQPHIQWLKHIEVNGSKIGPDNLPYDQILKTAGVNTTDKEMEVLHLRNVSFE 334

  Fly   672 TTTSTTTTAPPAVTAPSNEVYIGIVESSSSASPADISSTVIANERDLNMEMRRMNLVTLVLVAVG 736
            .....|..|..::....:..::.::|:                     :|.|         .||.
  Rat   335 DAGEYTCLAGNSIGLSHHSAWLTVLEA---------------------LEER---------PAVM 369

  Fly   737 VIPL-AAIILYLVRNFVIRRRAKQSEVFDVCITDQQPISPVKKVDSKYQVDDDEDEVDHQHHQHM 800
            ..|| ..||:|....|:|.           |:.....|..:|....|...               
  Rat   370 TSPLYLEIIIYCTGAFLIS-----------CMVGSVIIYKMKSGTKKSDF--------------- 408

  Fly   801 QHHQNHQNHQNHQHHQAMPMSQASQRDANHNRYGN-----------NDDKTSLASEFHDFE---- 850
                 |.....|:..:::|:.:.....|:.:...|           :...|.:.:...::|    
  Rat   409 -----HSQMAVHKLAKSIPLRRQVTVSADSSASMNSGVLLVRPSRLSSSGTPMLAGVSEYELPED 468

  Fly   851 ------RSNIRLKSLLGEGNFGQVWKAEADDLSGHFGATRI--VAVKTIRACSAQVSLKD---EA 904
                  |..:.|...||||.||||..|||..|... ...|:  ||||.:::.:.:..|.|   |.
  Rat   469 PRWELPRDRLVLGKPLGEGCFGQVVLAEAIGLDKD-KPNRVTKVAVKMLKSDATEKDLSDLISEM 532

  Fly   905 NIMRKLGSHQNVVTLLGACVESEPHMLIMEYAMRGRLLSLLRAARSATNILPASV-----PGGRS 964
            .:|:.:|.|:|::.|||||.:..|..:|:|||.:|.|...|:|.|      |..:     |....
  Rat   533 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR------PPGLEYCYNPSHNP 591

  Fly   965 LAPLSPRTLAGFALDIACGMEYIAGRRIVHRDLAARNVLLDHNGMCKICDFGMSIDLDAERMRKE 1029
            ...||.:.|...|..:|.||||:|.::.:||||||||||:..:.:.||.|||::.|:        
  Rat   592 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-------- 648

  Fly  1030 QEKNAANDLMRHNAHKFKFDFGSRYILQHWQHTFGQGQGQGHCSKDQPHGEKKSHHGHDTIGKRH 1094
                       |:...:                                  ||:.:|.       
  Rat   649 -----------HHIDYY----------------------------------KKTTNGR------- 661

  Fly  1095 ALPIRWMAPESLQYHMFTTETDIWAFGIVLWEIATLGSTPYSQLTGREVIRRVPQGLRPDLPKES 1159
             ||::|||||:|...::|.::|:|:||::||||.|||.:|...:...|:.:.:.:|.|.|.|...
  Rat   662 -LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPNPGVPVEELFKLLKEGHRMDKPSNC 725

  Fly  1160 RHEFYNLMSRCWHKEPHMRPSFAQSRLEITRSLHKWVDDDSAASDYMDVS 1209
            .:|.|.:|..||:..|..||:|.|...::.|.:..     ::..:|:|:|
  Rat   726 TNELYMMMRDCWNAVPSQRPTFKQLVEDLDRIVAL-----TSNQEYLDLS 770

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TieNP_523928.1 TyrKc 854..1183 CDD:197581 107/338 (32%)
PTKc 860..1187 CDD:270623 107/336 (32%)
Fgfr1NP_077060.1 Ig1_FGFR 40..118 CDD:143174 12/78 (15%)
IG_like 41..118 CDD:214653 12/77 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..162 9/41 (22%)
I-set 160..247 CDD:254352 14/88 (16%)
Heparin-binding 160..177 2/17 (12%)
Ig2_FGFR 163..247 CDD:143265 14/85 (16%)
IG_like 262..358 CDD:214653 19/102 (19%)
Ig3_FGFR 270..359 CDD:143175 17/92 (18%)
PTKc_FGFR1 464..765 CDD:270678 111/373 (30%)
Pkinase_Tyr 478..754 CDD:285015 108/343 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 770..822 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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