DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tie and fgfr3

DIOPT Version :9

Sequence 1:NP_523928.1 Gene:Tie / 38559 FlyBaseID:FBgn0014073 Length:1233 Species:Drosophila melanogaster
Sequence 2:XP_021336328.1 Gene:fgfr3 / 58129 ZFINID:ZDB-GENE-000816-1 Length:821 Species:Danio rerio


Alignment Length:513 Identity:136/513 - (26%)
Similarity:221/513 - (43%) Gaps:134/513 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   720 MEMRRMNLVTLVLVAVG---VIPLAAIILYLVRNFVIRRRAKQSEVFDVCITDQQPISPVKKVDS 781
            :||.|.:....:|:.|.   :..|..:|:.|.|.::..::.             .|..||:|: |
Zfish   372 VEMEREDDYADILIYVTSCVLFILTMVIIILCRMWINTQKT-------------LPAPPVQKL-S 422

  Fly   782 KYQVDDDEDEVDHQHHQHMQHHQNHQNHQNHQHHQAMPMSQASQRDANHNRYGNNDDKTSLASE- 845
            |:.               ::.........|...:...|:.:.::..::......|..:..|.|: 
Zfish   423 KFP---------------LKRQVTVSLESNSSMNSNTPLVRIARLSSSDGPMLPNVSELELPSDP 472

  Fly   846 FHDFERSNIRLKSLLGEGNFGQVWKAEADDLSGHFGATR-------IVAVKTIRACSAQVSLKD- 902
            ..:|.|:.:.|...||||.||||..|||      .|..:       .||||.::.......|.| 
Zfish   473 KWEFTRTKLTLGKPLGEGCFGQVVMAEA------IGIDKEKPNKPLTVAVKMLKDDGTDKDLSDL 531

  Fly   903 --EANIMRKLGSHQNVVTLLGACVESEPHMLIMEYAMRGRLLSLLRAARSATNILPASVPGGRSL 965
              |..:|:.:|.|:|::.|||||.:..|..:::|||.:|.|...|||.|          |.|...
Zfish   532 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARR----------PPGMDY 586

  Fly   966 A---------PLSPRTLAGFALDIACGMEYIAGRRIVHRDLAARNVLLDHNGMCKICDFGMSIDL 1021
            :         .|:.:.|...|..:|.||||:|.::.:||||||||||:..:.:.||.|||::.|:
Zfish   587 SFDTCKIPNETLTFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDV 651

  Fly  1022 DAERMRKEQEKNAANDLMRHNAHKFKFDFGSRYILQHWQHTFGQGQGQGHCSKDQPHGEKKSHHG 1086
                               ||...:                                  ||:.:|
Zfish   652 -------------------HNIDYY----------------------------------KKTTNG 663

  Fly  1087 HDTIGKRHALPIRWMAPESLQYHMFTTETDIWAFGIVLWEIATLGSTPYSQLTGREVIRRVPQGL 1151
            .        ||::|||||:|...::|.::|:|::|::||||.|||.:||..:...|:.:.:.:|.
Zfish   664 R--------LPVKWMAPEALFDRVYTHQSDVWSYGVLLWEIFTLGGSPYPGIPVEELFKLLKEGH 720

  Fly  1152 RPDLPKESRHEFYNLMSRCWHKEPHMRPSFAQSRLEITRSLHKWVDDDSAASDYMDVS 1209
            |.|.|....||.|.:|..|||..|..||:|.|...:     |..|...::..:|:|:|
Zfish   721 RMDKPANCTHELYMIMRECWHAVPSQRPTFRQLVED-----HDRVLSMTSTDEYLDLS 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TieNP_523928.1 TyrKc 854..1183 CDD:197581 108/347 (31%)
PTKc 860..1187 CDD:270623 108/345 (31%)
fgfr3XP_021336328.1 IGc2 67..121 CDD:197706
Ig2_FGFR 173..257 CDD:143265
Ig3_FGFR-2 280..369 CDD:143266
PTKc_FGFR3 468..801 CDD:173652 118/388 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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