DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tie and flt1

DIOPT Version :9

Sequence 1:NP_523928.1 Gene:Tie / 38559 FlyBaseID:FBgn0014073 Length:1233 Species:Drosophila melanogaster
Sequence 2:NP_001014829.3 Gene:flt1 / 544667 ZFINID:ZDB-GENE-050407-1 Length:1272 Species:Danio rerio


Alignment Length:1117 Identity:241/1117 - (21%)
Similarity:379/1117 - (33%) Gaps:371/1117 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 FTRMAMPSNGNSSVVLKGSASLKAAAPAGDRDTN-EILFSDESSHGLFVVAKEQNGTLNHIADGT 313
            ::.:.:||...:.   ||....:..:....|:|| .::..|:.    |:..|.:||.:.....|.
Zfish   285 YSVLTIPSLSKAD---KGLYKCQVTSGPSKRETNTTVIVYDQP----FIRLKHRNGPVVQAFAGQ 342

  Fly   314 K-----PAVMGKGIPSKTNSMEDDVEEEEDELKPYVYFGAKLPPIRPGGLTIKAAEGDDDHPRVL 373
            |     |.:  |..|:.......|.....:....|...|..| .||      ..||.|.....:|
Zfish   343 KSFRLTPKL--KAFPAPEIIWLKDGMVAAERCSRYHVDGFSL-VIR------DVAEEDAGIYTIL 398

  Fly   374 ----EVSVAQSTTPTITTTSTTPAPVSSTRP-----TASTRRPLTPVERSRSKYKYHMRERGLVP 429
                :..:.|:.|.|:         |.:.:|     :.|:::|.| |:|. |:...|....|:  
Zfish   399 TGIQQYGLFQNLTITL---------VVNVKPQIGEKSVSSQQPGT-VQRG-SRQALHCTSHGV-- 450

  Fly   430 TAAPPPAAP----PAPPVSRTRYVGSGRPTAGLSDSIQDLKQTESEVAKPVVRRVVQKVSPSSST 490
               |||...    |.||             .||           .|...|.....|:|.:..:||
Zfish   451 ---PPPQIQWLWHPCPP-------------KGL-----------CEKPPPSSWTAVRKKTGVTST 488

  Fly   491 PLIITVLSAEEETTVGQT---------EALPTDESTTTTS---------------------TTTT 525
            ...|..:|..:|...|:.         |||.:......||                     ..:.
Zfish   489 HNPILTISHRQEVLEGKNKTVGVLTVGEALVSGIYRCVTSNILGRDELDIPFYVTDVKEGLVASL 553

  Fly   526 TEKP--------------------STTTSTSTTTTTPVPSTSKRTTTNAPLSTT----------- 559
            .|:|                    |.:..||..|.....|......|....|.|           
Zfish   554 VEEPREGGDLRLLCIANRHLYSDLSWSRITSQITVWDEASGLDGELTEGQFSHTLHFGLKNLTAR 618

  Fly   560 NTPTTTTSSTTPSTTTTSSTSTTVIPTTTKANSIIEKDKELIRALGPALTREINIDDANNLIVFC 624
            ::.|...|:|...|.......|.|..|..:|..:          ||......:|:  :|::.:.|
Zfish   619 DSGTYRCSATHLLTGEHIHLDTAVEVTVLQAPVL----------LGNLSDHTVNV--SNSITLHC 671

  Fly   625 NNTSDCGVTPRTQTQPSHTTDSSPKILRTT---VLTSIRSTVHPRPTSTSTTTSTTTTAPPAVTA 686
                    ..|...||..|...:.:.|:..   :|.....|:|....:.......|..|.....:
Zfish   672 --------PARGVPQPHITWYKNQRKLQQVSGIMLFPEEGTLHIDRITVEDQGFYTCQATNQRGS 728

  Fly   687 PSNEVYIGIVESSSSASPADISSTVIANERDLNMEMRRMNLVTLVLVAVGVIPLAAIILYLVRNF 751
            ..:..||.:..||.|.|                     :.:.||....|     .|.:.:|:...
Zfish   729 VESSAYIWVQNSSESLS---------------------LEIPTLACTCV-----VATLFWLLLTL 767

  Fly   752 VIRRRAKQSEVFDVCITDQQPISPVKKVDSKYQVDDDEDEVDHQHHQHMQHHQNHQNHQNHQ--- 813
            :||:                                                ..|.|..|.:   
Zfish   768 LIRK------------------------------------------------LKHPNSDNGKAEY 784

  Fly   814 -----HHQAMPMSQASQRDANHNRYGNNDDKTSLASEFHDFERSNIRLKSLLGEGNFGQVWKAEA 873
                 |....|:.:             :.|:........:|.|..::|:..||.|.||:|.:|.|
Zfish   785 LPIILHPGEEPLVE-------------HCDRLQYDPAKWEFPRDRLKLEKPLGRGAFGRVMQASA 836

  Fly   874 DDLSGHFGATRIVAVKTIR---ACSAQVSLKDEANIMRKLGSHQNVVTLLGACVES-EPHMLIME 934
            ..: |:..:...||||.::   ..|...:|..|..|:..:|.|.|||.|||||.:| .|.|:|:|
Zfish   837 VGI-GNSASCTTVAVKMLKDGATPSEHKALMTELKILNHIGHHINVVNLLGACTKSGGPLMVIVE 900

  Fly   935 YAMRGRLLSLLRAARSA----------TNILP-------ASVPGGRSLA---------------- 966
            |...|.|.:.|::.|..          ..::.       .||...:|.|                
Zfish   901 YCQFGNLSAYLKSKREVFLLNRVNKEEEGVMKEGCKGRLTSVSSRQSNASSGFSEERGEISEEDS 965

  Fly   967 --------PLSPRTLAGFALDIACGMEYIAGRRIVHRDLAARNVLLDHNGMCKICDFGMSIDL-- 1021
                    ||....|..::..:|.|||::|.|:.:||||||||:||.:|.:.||||||::.||  
Zfish   966 DCLSELSDPLLLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSNNNVVKICDFGLARDLYK 1030

  Fly  1022 DAERMRKEQEKNAANDLMRHNAHKFKFDFGSRYILQHWQHTFGQGQGQGHCSKDQPHGEKKSHHG 1086
            |.:.:|                                                  :|:.:    
Zfish  1031 DPDYVR--------------------------------------------------NGDAR---- 1041

  Fly  1087 HDTIGKRHALPIRWMAPESLQYHMFTTETDIWAFGIVLWEIATLGSTPYSQLT-GREVIRRVPQG 1150
                     ||::||||||:...:|||::|:|::|::||||.:||::||..|. ..|..||:..|
Zfish  1042 ---------LPLKWMAPESIFDKVFTTQSDVWSYGVLLWEIFSLGASPYPGLNMDEEFCRRLKHG 1097

  Fly  1151 LRPDLPKESRHEFYNLMSRCWHKEPHMRPSFAQSRLEITRS-LHKWVDDDSAASDYMDVSGFSED 1214
            .|...|:.|..|.|::|..||...|..||||. :.:||... |...|..|  ..||:.::.|...
Zfish  1098 TRMCSPQYSTPEIYSIMCACWENNPEDRPSFT-TLVEILGDLLQTCVQQD--GKDYIPLNAFKSG 1159

  Fly  1215 LEHGV-VYFNHR 1225
            ..|.: .:.|.|
Zfish  1160 EGHTITTHLNQR 1171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TieNP_523928.1 TyrKc 854..1183 CDD:197581 113/376 (30%)
PTKc 860..1187 CDD:270623 112/374 (30%)
flt1NP_001014829.3 Ig 238..321 CDD:386229 7/38 (18%)
Ig_VEGFR-1 345..416 CDD:143326 16/88 (18%)
Ig_3 426..529 CDD:372822 30/133 (23%)
IG 558..646 CDD:214652 14/87 (16%)
I-set 650..733 CDD:369462 15/102 (15%)
PTKc_VEGFR 809..1138 CDD:270647 117/393 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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