DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tie and lyn

DIOPT Version :9

Sequence 1:NP_523928.1 Gene:Tie / 38559 FlyBaseID:FBgn0014073 Length:1233 Species:Drosophila melanogaster
Sequence 2:NP_001004543.1 Gene:lyn / 447804 ZFINID:ZDB-GENE-040912-7 Length:510 Species:Danio rerio


Alignment Length:585 Identity:132/585 - (22%)
Similarity:222/585 - (37%) Gaps:173/585 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   664 HPRPTSTSTTTSTTTTAPPAVTAPSNEVYIGIVESSSSASPADISSTVIANER------------ 716
            ||..|..:.....|:..||            |...::...|..:...:...|:            
Zfish    24 HPVRTDQTYVRDPTSYKPP------------ITSQNAGLLPGQVFQKMEEKEKIVVALYPYEAIH 76

  Fly   717 --DLNMEM-RRMNLV----------TLVLVAVGVIPLAAIILYLVRNFVIRRRAKQSEVF---DV 765
              ||..:. .::.::          :|.....|.||         .|:|......::|.:   |:
Zfish    77 ADDLGFKKGEKLKIIEEHGEWWKARSLTTRKEGFIP---------SNYVAEADTMETEEWFYKDI 132

  Fly   766 CITD--QQPISPVKKVDSKYQVDDDED----------EVDHQHHQHMQHHQ-------------- 804
            ...|  :|.::|..|..| |.:.:.|.          :||.|....::|::              
Zfish   133 TRKDAERQLLAPANKPGS-YLIRESETSKGSYSLSIRDVDAQGQDVVKHYKIRSLDNGGYYISPK 196

  Fly   805 ----NHQNHQNHQHHQAMPMSQASQRDANHNRYGNNDDKTSLASEFHDFERSNIRLKSLLGEGNF 865
                :..:...|.|.|:..:.:...:.....:.....||     :..:..:.:|::...||.|.|
Zfish   197 ITFSDISSMIKHYHKQSDGLCRKLDKACEKPKAQKPWDK-----DAWEISKDSIKMVKKLGAGQF 256

  Fly   866 GQVWKAEADDLSGHFGATRIVAVKTIRACSAQV-SLKDEANIMRKLGSHQNVVTLLGACVESEPH 929
            |:||.|       .:..:..|||||::..:..| :..:|||:|:.| .|..:|.|.....::||.
Zfish   257 GEVWMA-------FYNNSTKVAVKTLKPGTMSVEAFLEEANLMKTL-QHDRLVRLYAVVTKTEPI 313

  Fly   930 MLIMEYAMRGRLLSLLRAARSATNILPASVPGGRSLAPLSPRTLAGFALDIACGMEYIAGRRIVH 994
            .:|.||...|.||..|::...:...||               .|..|:..||.||.||..:..:|
Zfish   314 YIITEYMANGSLLDFLKSQAGSKIQLP---------------KLIDFSAQIAEGMAYIEKKNYIH 363

  Fly   995 RDLAARNVLLDHNGMCKICDFGMSIDLDAERMRKEQEKNAANDLMRHNAHKFKFDFGSRYILQHW 1059
            |||.|.|||:....:|||.|||::                                   .:::..
Zfish   364 RDLRAANVLVSEMLLCKIADFGLA-----------------------------------RVIEDD 393

  Fly  1060 QHTFGQGQGQGHCSKDQPHGEKKSHHGHDTIGKRHALPIRWMAPESLQYHMFTTETDIWAFGIVL 1124
            |:|..:|.                           ..||:|.|||::.|..||.::|:|:||::|
Zfish   394 QYTAREGA---------------------------KFPIKWTAPEAINYGSFTIKSDMWSFGVLL 431

  Fly  1125 WEIATLGSTPYSQLTGREVIRRVPQGLRPDLPKESRHEFYNLMSRCWHKEPHMRPSF--AQSRLE 1187
            :||.|.|..||..::..||:..|.:|.|...|:....|.|.:|:.||..:|..||:|  .||.|:
Zfish   432 YEIITYGKIPYPGMSNSEVMSSVQRGYRMPRPENCPVELYEIMTTCWKNKPEDRPTFDYIQSVLD 496

  Fly  1188  1187
            Zfish   497  496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TieNP_523928.1 TyrKc 854..1183 CDD:197581 94/331 (28%)
PTKc 860..1187 CDD:270623 95/329 (29%)
lynNP_001004543.1 SH3_Lyn 65..120 CDD:212937 8/63 (13%)
SH2_Src_Lyn 123..223 CDD:198227 16/100 (16%)
PTKc_Lyn 237..508 CDD:270657 97/345 (28%)
Pkinase_Tyr 245..495 CDD:285015 96/334 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D539311at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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