DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tie and Csk

DIOPT Version :9

Sequence 1:NP_523928.1 Gene:Tie / 38559 FlyBaseID:FBgn0014073 Length:1233 Species:Drosophila melanogaster
Sequence 2:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster


Alignment Length:1227 Identity:236/1227 - (19%)
Similarity:412/1227 - (33%) Gaps:398/1227 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 TYRPSGANRPSIAPLNSAQDRERKLMNVLAARRTALHRGGFRTRIGTTGRTAISPSAAVESTSKA 219
            |..||||:    |.::|:.:|..|..:..|                       |||.:...:..:
  Fly    23 TPSPSGAD----ATVSSSLERVLKPASASA-----------------------SPSNSNNESDNS 60

  Fly   220 PSDPRSVCIRNCTKNFTRRTTASCMRQCANFTRMAMPSNGNSSVVLKGSASLKAAAPAG----DR 280
            .:...|....:.:|...|....|.....|..||.............|.|....|||...    .|
  Fly    61 QTSSGSQTASSASKRSNRSVGRSHRGSIAQDTRRRYYFGSKDIYWCKQSREAAAAATLSGSGLTR 125

  Fly   281 DTNEILFSDESSH----GLFVVAKEQNGTLNHIADGTKPAVMGKGIPSKTNSMEDDVEEEEDELK 341
            ..:.:...:.|:|    |..|:::.:.          ||.::...:.:                 
  Fly   126 SASSVTHKEASTHATHTGGQVISRARR----------KPILLCSSLSA----------------- 163

  Fly   342 PYVYFGAKLPPIR----------PGGLTIKAAEGDDDHPRVLEVSVAQSTTPTITTTSTTPAPVS 396
                  |..||.|          ||                     ...:|||.||||.|.|...
  Fly   164 ------AYAPPRRREFYFCDKYAPG---------------------PARSTPTTTTTSATSAKHE 201

  Fly   397 STRPTAS--------------TRRPLTPVERSRSKYKYHMRER----GLVPTAAPPPAA------ 437
            |:.|..:              ..:..|.:::::.::..:.|||    |...:.:.||.|      
  Fly   202 SSPPIDARLLNFLRCAHRKFQASKAKTELQQTKDRFLGNSRERTSKNGQQTSRSLPPIASSEEWF 266

  Fly   438 PPAPPVSRTRYVGSGRPTAGLSDSIQDLKQTESEVAKPVVRRVVQKVSPSSSTPLIITV-----L 497
            .......:|.:..|.:|..         |..|:...|..:.|   |.|....   :|||     |
  Fly   267 DEEAQARKTSHEKSQKPKP---------KPEENHKEKEAISR---KASGEGD---LITVEIKQGL 316

  Fly   498 SAEEETTVGQTEALPTDESTTTTSTTTTT------EKPSTT----TSTSTTTTTP--VPSTSKRT 550
            ..::..|....:|:.:..:.|....||..      .:||.|    .:|.:|...|  :.:|..:.
  Fly   317 LRKQTATTTTGQAMNSHATATQNGQTTVVGHHRGFSQPSVTVAAAAATGSTAGDPWFLQTTGHQM 381

  Fly   551 TTNAPLSTTNTPT--------TTTSSTTPSTTT---------TSSTSTTVIPTTTKANSIIEKDK 598
            ...|||.....|.        ..:|.|.|.:..         .|.:...::|.:...:....::.
  Fly   382 PPTAPLRHNKRPAPQPNAVLGAGSSGTAPGSAVGAVLLHQQQLSQSQPHIVPPSIPPHHHHHREN 446

  Fly   599 EL--IRA-LGPALTREINIDDANNLIVFCNNTSDCGVTPRTQTQPSHTTDSSPKILRTTVLTSIR 660
            .:  |:| ...||....:..:::|||...:|.|.  .:|....|...||:...:..:.....||.
  Fly   447 NVHPIQAGAAAALHLSSHALNSHNLISSASNHSP--KSPSQTQQQQQTTNQQQQQQQQQASHSIL 509

  Fly   661 STVHPRPT------STSTTTSTTTTAPPAVTAPSNEVYIGIVESSSSASPADISSTVIANERDLN 719
            ||..|.||      :.|.:.:.|..|..||.....:.::.::.:........:||::.|.:..::
  Fly   510 STFAPAPTVAAVQPAGSQSVAGTAAAVAAVAQQQQQQHLQLLANCPPGGAGLMSSSLNAAQMGMH 574

  Fly   720 MEMRRMNLVTLVL------------------------VAVGV----------------------- 737
            ...|.:...:|.|                        ..|||                       
  Fly   575 GAERALPPKSLALSGSQHGSNMLLHTAPQPPQASQPAAVVGVSGSGSAGMSTSLHSFDINGVTAG 639

  Fly   738 -------------------------------------IPLAAIILY---LVRN------------ 750
                                                 :.|.|:..:   :.|:            
  Fly   640 SGVNASSAWSSGSTTAMNHASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAEHLLQPREDG 704

  Fly   751 -FVIRRRAKQSEVFDVCITDQQPIS--PVKKVDSKYQVDDDEDEVDHQHHQHMQHHQNHQNHQNH 812
             |::|........:.:|:..|..:.  .||.:::|..:||  :|......|.:.|::...:....
  Fly   705 LFLVRESTNFPGDYTLCVCFQSKVEHYRVKYLENKLTIDD--EEYFENLGQLVAHYEADADGLCT 767

  Fly   813 QHHQAMPMSQASQRDANHNRYGNNDDKTSLASEFHD----FERSNIRLKSLLGEGNFGQVWKAEA 873
            |..:.:|.....:...|             :.:|.|    ...:.::|:..:|:|.||.|.    
  Fly   768 QLIKCLPKLGKQEFCIN-------------SKDFVDKGWVIPEAELQLRESIGKGEFGDVM---- 815

  Fly   874 DDLSGHFGATR--IVAVKTIRACSAQVSLKDEANIMRKLGSHQNVVTLLGACVESEPHMLIMEYA 936
                  .|..|  .||||.::...|......||::|..| .|.|:|..:|....|:...|:.||.
  Fly   816 ------LGILRNEKVAVKMLKDEGAVQKFLAEASVMTTL-EHDNLVKFIGLVFTSKHLYLVTEYM 873

  Fly   937 MRGRLLSLLRAARSATNILPASVPGGRSLAPLSPRTLAGFALDIACGMEYIAGRRIVHRDLAARN 1001
            .:|.|:..||:               |....::.:....||.|.|.||||:..:::|||||||||
  Fly   874 SKGSLVDYLRS---------------RGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARN 923

  Fly  1002 VLLDHNGMCKICDFGMSIDLDAERMRKEQEKNAANDLMRHNAHKFKFDFGSRYILQHWQHTFGQG 1066
            ||:..:.:.|:.|||::        |:|               .:..|.|.              
  Fly   924 VLISEDCVAKVSDFGLA--------REE---------------CYNLDVGK-------------- 951

  Fly  1067 QGQGHCSKDQPHGEKKSHHGHDTIGKRHALPIRWMAPESLQYHMFTTETDIWAFGIVLWEIATLG 1131
                                         |||:|.|||:|:...|:.::|:|:|||:||||.:.|
  Fly   952 -----------------------------LPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFG 987

  Fly  1132 STPYSQLTGREVIRRVPQGLRPDLPKESRHEFYNLMSRCWHKEPHMRPSFAQSRLEI 1188
            ..||.::...:|::.|..|.:.:.|:....|.|.:|.:.|...|..||:||:.::::
  Fly   988 RVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELKVKL 1044

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TieNP_523928.1 TyrKc 854..1183 CDD:197581 90/330 (27%)
PTKc 860..1187 CDD:270623 90/328 (27%)
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 16/98 (16%)
PTKc_Csk_like 793..1047 CDD:270635 91/344 (26%)
STYKc 800..1044 CDD:214568 91/335 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D539311at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.010

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