DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tie and Ptk6

DIOPT Version :9

Sequence 1:NP_523928.1 Gene:Tie / 38559 FlyBaseID:FBgn0014073 Length:1233 Species:Drosophila melanogaster
Sequence 2:NP_001102438.1 Gene:Ptk6 / 366275 RGDID:1309098 Length:451 Species:Rattus norvegicus


Alignment Length:475 Identity:120/475 - (25%)
Similarity:182/475 - (38%) Gaps:140/475 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   746 YLVRNFVIRRRAKQSEV-FDVCITDQQPISPVK-----------KVDSKYQVDD-----DEDEVD 793
            |:..|::..:...:||. |..||:..:.:..::           :|..|...|.     |.:.|.
  Rat    61 YVPHNYLAEKETVESEPWFFGCISRSEAMHRLQSEDYPKGTFLIRVSQKPGADYVLSVWDAEAVR 125

  Fly   794 HQHHQHMQHHQNHQN--------------HQNHQHHQAMPMSQASQRDANHNRYGNNDDKTSLAS 844
            |.........:.|.|              |:.|.....:.:|.|..:           .||....
  Rat   126 HYRIWRNSAGRLHLNEVVSFSSLSELVNYHKTHNLSPGLQLSMACWK-----------LKTEPLP 179

  Fly   845 EFHDFE--RSNIRLKSLLGEGNFGQV----WKAEADDLSGHFGATRIVAVKTIRACSA--QVSLK 901
            .:.|:|  |....|...||.|.||:|    ||          |..| ||||.|...:.  |.:.:
  Rat   180 HWDDWERPREEFTLCKKLGSGYFGEVFEGLWK----------GLVR-VAVKVISRDNLLHQHTFQ 233

  Fly   902 DEANIMRKLGSHQNVVTLLGACVESEPHMLIMEYAMRGRLLSLLRAARSATNILPASVPGGRSLA 966
            .|...|:|| .|:::::|.......:|..:|.|...:|.||.|||  .|....||.         
  Rat   234 AEIQAMKKL-RHKHILSLYAVATAGDPVYIITELMPKGSLLQLLR--DSDEKDLPI--------- 286

  Fly   967 PLSPRTLAGFALDIACGMEYIAGRRIVHRDLAARNVLLDHNGMCKICDFGMSIDLDAERMRKEQE 1031
                ..|..||..:|.||.|:..:..:||||||||||:..|.:||:.|||::      |:.||  
  Rat   287 ----LELVDFASQVAEGMCYLESQNYIHRDLAARNVLVTENNLCKVGDFGLA------RLVKE-- 339

  Fly  1032 KNAANDLMRHNAHKFKFDFGSRYILQHWQHTFGQGQGQGHCSKDQPHGEKKSHHGHDTIGKRHAL 1096
                 |:                                :.|:|                  |.:
  Rat   340 -----DI--------------------------------YLSRD------------------HNV 349

  Fly  1097 PIRWMAPESLQYHMFTTETDIWAFGIVLWEIATLGSTPYSQLTGREVIRRVPQGLRPDLPKESRH 1161
            |.:|.|||:|....::.::|:|:||::|.||.:.|..||..::..|...||..|.|...|.|...
  Rat   350 PYKWTAPEALSRGHYSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMPCPLECPP 414

  Fly  1162 EFYNLMSRCWHKEPHMRPSF 1181
            ..:.||..||.::|..||.|
  Rat   415 NIHKLMLSCWSRDPKQRPCF 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TieNP_523928.1 TyrKc 854..1183 CDD:197581 96/334 (29%)
PTKc 860..1187 CDD:270623 95/328 (29%)
Ptk6NP_001102438.1 SH3_Brk 12..69 CDD:212781 2/7 (29%)
SH2_PTK6_Brk 75..174 CDD:198221 17/109 (16%)
PKc_like 184..444 CDD:304357 98/341 (29%)
STYKc 192..441 CDD:214568 96/333 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D539311at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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