DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tie and ver-4

DIOPT Version :9

Sequence 1:NP_523928.1 Gene:Tie / 38559 FlyBaseID:FBgn0014073 Length:1233 Species:Drosophila melanogaster
Sequence 2:NP_509835.2 Gene:ver-4 / 186632 WormBaseID:WBGene00006897 Length:1216 Species:Caenorhabditis elegans


Alignment Length:410 Identity:105/410 - (25%)
Similarity:162/410 - (39%) Gaps:118/410 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   844 SEFHDFERSNIRLKSLLGEGNFGQVWKAEADDLSG-HFG-ATRI-VAVKTIRACSAQVSLK---- 901
            :|.::.:..|:.:...||.|.||.|.|...:..|. :|| .:|: ||:|: ...|:.:.|:    
 Worm   860 NEDYEIDLENLEILETLGSGQFGIVKKGYLNMASSKNFGFESRLSVAIKS-STDSSNMELQKMFF 923

  Fly   902 DEANIMRKLGSHQNVVTLLGAC---VESEPHMLIMEYAMRGRLLSLLRAARSA------------ 951
            :|..:|..:..|.||::|:||.   :|.....::.|....|.|...||..|..            
 Worm   924 EELKLMCAIPKHPNVLSLVGAVTKNMEIGELFIVTELIDGGNLREFLRERRDVFANELVEKGYIF 988

  Fly   952 -TNILPASVPGGR---------SLAPLSPRTLAGFALDIACGMEYIAGRRIVHRDLAARNVLLDH 1006
             ||: ..:||...         ....|....|....|.||.||:::|....||||||.||||:..
 Worm   989 LTNV-RENVPKREVEKEQLLIDEFNSLCTSDLLSIGLQIANGMDWLANIPCVHRDLACRNVLISK 1052

  Fly  1007 NGMCKICDFGMSIDLDAERMRKEQEKNAANDLMRHNAHKFKFDFGSRYILQHWQHTFGQGQGQGH 1071
            ..:.:|.|||::        :|..:|                   :.|.::.             
 Worm  1053 TKIIRIADFGLA--------KKHTDK-------------------AYYRVRE------------- 1077

  Fly  1072 CSKDQPHGEKKSHHGHDTIGKRHALPIRWMAPESLQYHMFTTETDIWAFGIVLWEIATLGSTPYS 1136
             |.|.|                  ||:|||..||:....||.::|:|::||.|:||.|||.|||.
 Worm  1078 -SLDTP------------------LPVRWMPLESITDLTFTQKSDVWSYGICLYEIFTLGGTPYP 1123

  Fly  1137 QLTGREVIRRVPQGLRPDLPKESRHEFYNLMSRCWHKEPHMRPSFAQ-------------SRL-- 1186
            ......::..:..|.....|.....:.|.:|..||...|..||:||:             |:|  
 Worm  1124 DCPNFSLVEYIKTGNINKRPSNCHKDVYKIMKMCWQASPDDRPTFAECIKLFKNHIQYFASKLLQ 1188

  Fly  1187 EITRSL----------HKWV 1196
            :|.:.|          |.||
 Worm  1189 QIEKDLECEKNNQQKFHYWV 1208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TieNP_523928.1 TyrKc 854..1183 CDD:197581 95/360 (26%)
PTKc 860..1187 CDD:270623 98/373 (26%)
ver-4NP_509835.2 ig 609..679 CDD:278476
IG_like 611..692 CDD:214653
IG_like 709..782 CDD:214653
IGc2 714..772 CDD:197706
STYKc 870..1175 CDD:214568 96/365 (26%)
PTKc 874..1176 CDD:270623 96/362 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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