DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tie and igcm-4

DIOPT Version :9

Sequence 1:NP_523928.1 Gene:Tie / 38559 FlyBaseID:FBgn0014073 Length:1233 Species:Drosophila melanogaster
Sequence 2:NP_508377.1 Gene:igcm-4 / 180518 WormBaseID:WBGene00022418 Length:541 Species:Caenorhabditis elegans


Alignment Length:570 Identity:107/570 - (18%)
Similarity:181/570 - (31%) Gaps:153/570 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   353 IRPGGLTIKAAEGDDDHPRVLEVSVAQSTTPTITTTSTTPAPVSSTR---PTASTRRPLTPVERS 414
            |||   .::||.|..  ||:..|.          |....|......|   |..:|.:..|.::.|
 Worm    22 IRP---HVEAARGMP--PRMRNVE----------TKFRIPLGQKQFRLVCPIIATEKDSTMIQWS 71

  Fly   415 R--------SKYKYHMRERGLVPTAAPPPAAPPAPPVSRTRYVGSGR----PTAGLSDS------ 461
            :        |:||.....:.|              .:...::..|||    .|.|....      
 Worm    72 KNGEQLDWDSQYKLSKDSKEL--------------KMKSVKFEDSGRYQCQATNGFGHKTIEFIV 122

  Fly   462 -IQDLKQTESEVAKPVVRRVVQKVSPSSSTPLIITVLSAE-----EETTVGQTE------ALPTD 514
             :.|....|:.|...:|      :|.::::|..:..:::|     :..|.|:.|      ..|..
 Worm   123 HVHDQHDKENSVKDYLV------LSNTTASPSWLIDMNSEWRSPIKINTGGKLELRCPAQGNPLP 181

  Fly   515 ESTTTTSTTTTTEKPSTTTSTSTTTTTPVPSTSK---RTTTNAPLSTTN-----------TPTTT 565
            |.....:....:||  |....||.|..||.|:..   |.....||.:.:           .||||
 Worm   182 EIRWYQNEMEISEK--THKHVSTITVEPVESSHSGVYRCVVENPLGSLSFAFDVSVGDFFDPTTT 244

  Fly   566 TSSTTPSTTT-------------TSSTSTTVIPTTTKANSIIEKDKELIRALGPALTREINIDDA 617
            .::....|..             ...|:.......:..|:||:..||:...|      .|...|.
 Worm   245 EATEYQETAMEPVIDQPYNISVYAGHTAQFQCKVKSNENTIIKWLKEVSDPL------SIRRKDP 303

  Fly   618 NNLIVFCNNTSDCGVTPRTQTQPSHTTDSSPKILRTTVLTSIRSTVHPRPTSTSTTTSTTTTAPP 682
            |:.::..|. .:..|....||:.|...:....|...      |.|:|                  
 Worm   304 NSTVIHVNG-MNLLVLDHIQTESSLPQEDMDNIYTN------RLTIH------------------ 343

  Fly   683 AVTAPSNEVYIGIVESSSSASPADISSTVIANERDLNMEMRRMNLVTLVLVAVGVIPLAAI--IL 745
            .|.......||.:|.|:........:...:.:..|.....:....:.|:.|.|.:.....|  |:
 Worm   344 KVDYHHAGKYICVVTSAQGQIVYKSAELKVLSAYDFTFPFKSDGFLVLLAVVVTLFIFVVILAII 408

  Fly   746 YLVRNFVIRRRAKQSEVFDVCITDQQPISPVKKVDSKYQVDDD--EDEVDHQHHQHMQHHQNHQN 808
            :|.:|    :.:...:       |.:|..|.:........|:|  .|...|.....:.|:...::
 Worm   409 WLKKN----QESTSGK-------DLKPPPPPRMPPPAAPQDNDWSSDRTLHSSKPLLLHNSMFKH 462

  Fly   809 HQNHQHHQA----MPMSQASQR-DANHNRYGNNDDKTSLASEFHDFERSN 853
            ....:.|.|    ..|.:|.:| |...|.|.|     |....:|..:|:|
 Worm   463 TNPIKFHAATMDRKNMIRAERRFDEVSNVYDN-----STLQPYHIQQRNN 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TieNP_523928.1 TyrKc 854..1183 CDD:197581 107/570 (19%)
PTKc 860..1187 CDD:270623
igcm-4NP_508377.1 IGc2 52..114 CDD:197706 14/75 (19%)
I-set 159..235 CDD:254352 17/77 (22%)
IGc2 166..225 CDD:197706 15/60 (25%)
IG_like 261..373 CDD:214653 24/142 (17%)
Ig 269..374 CDD:299845 24/135 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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