DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tie and src-1

DIOPT Version :9

Sequence 1:NP_523928.1 Gene:Tie / 38559 FlyBaseID:FBgn0014073 Length:1233 Species:Drosophila melanogaster
Sequence 2:NP_001364829.1 Gene:src-1 / 171722 WormBaseID:WBGene00005077 Length:537 Species:Caenorhabditis elegans


Alignment Length:481 Identity:122/481 - (25%)
Similarity:189/481 - (39%) Gaps:156/481 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   751 FVIRRRAKQSEVFDVCITDQQPISPVKKVDSKYQVDDDED--EVDHQHHQHMQHHQNH--QNHQN 811
            |:||.|...:..|.:.|.|               .||..:  .|.|...:.:.|.|.:  ...:.
 Worm   166 FLIREREADTREFALTIRD---------------TDDQRNGGTVKHYKIKRLDHDQGYFITTRRT 215

  Fly   812 HQHHQAM-------------------PMSQASQRDANHNRYGNNDDKTSLASEFHDFERSNIRLK 857
            .:..|.:                   |....::.|.:|:...|           .:..|:.:.||
 Worm   216 FRSLQELVRYYSDVPDGLCCQLTFPAPRLAPTRPDLSHDTQQN-----------WEIPRNQLHLK 269

  Fly   858 SLLGEGNFGQVWKAEADDLSGHFGATR---IVAVKTIR--ACSAQVSLKDEANIMRKLGSHQNVV 917
            ..||:||||:||          :|..|   .||:||::  ..|.:..|: ||.||::. .|.|:|
 Worm   270 RKLGDGNFGEVW----------YGKWRGIVEVAIKTMKPGTMSPEAFLQ-EAQIMKQC-DHPNLV 322

  Fly   918 TLLGACVESEPHMLIMEYAMRGRLLSLLRAARSATNILPASVPGGRSLAPLSPRTLAGFALDIAC 982
            .|...|...||..:|.||.:.|.||..||...|...|                :.|...|..||.
 Worm   323 KLYAVCTREEPFYIITEYMINGSLLQYLRTDGSTLGI----------------QALVDMAAQIAN 371

  Fly   983 GMEYIAGRRIVHRDLAARNVLLDHN----GMCKICDFGMSIDLDAERMRKEQEKNAANDLMRHNA 1043
            ||.|:..|::|||||||||||:...    .:.|:.|||:                 |..||..:.
 Worm   372 GMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGL-----------------ARKLMEEDI 419

  Fly  1044 HKFKFDFGSRYILQHWQHTFGQGQGQGHCSKDQPHGEKKSHHGHDTIGKRHALPIRWMAPESLQY 1108
            ::.:  .|:::                                          ||:|.|||:...
 Worm   420 YEAR--TGAKF------------------------------------------PIKWTAPEAATC 440

  Fly  1109 HMFTTETDIWAFGIVLWEIATLGSTPYSQLTGREVIRRVPQGLRPDLPKESRHEFY-NLMSRCWH 1172
            ..||.::|:|::||:|:||.|.|..||..:..|||:.:|..|.|..:|:....:.| .::.:||.
 Worm   441 GNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCPEQIYEEVLLKCWD 505

  Fly  1173 KEPHMRPSFAQSRLEITRSLHKWVDD 1198
            |.|..||:|        .:|:.:.||
 Worm   506 KTPDRRPTF--------DTLYHFFDD 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TieNP_523928.1 TyrKc 854..1183 CDD:197581 100/338 (30%)
PTKc 860..1187 CDD:270623 98/336 (29%)
src-1NP_001364829.1 SH3_Src_like 79..130 CDD:212779
SH2_Src_family 138..240 CDD:199827 14/88 (16%)
PTKc_Src_like 270..522 CDD:270630 99/348 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D539311at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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