DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NT1 and spz4

DIOPT Version :9

Sequence 1:NP_001261417.1 Gene:NT1 / 38558 FlyBaseID:FBgn0261526 Length:1042 Species:Drosophila melanogaster
Sequence 2:NP_609504.2 Gene:spz4 / 34572 FlyBaseID:FBgn0032362 Length:597 Species:Drosophila melanogaster


Alignment Length:487 Identity:107/487 - (21%)
Similarity:160/487 - (32%) Gaps:128/487 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 EDFFDEMGSEVL-DPQM--INEALTGDLHDNKTKTFKPENHGQRVRRSANEFVHKLTRSVPASVT 301
            |||.....::|| :|..  ::...|.......|.|..|            |.|...|..||..||
  Fly   155 EDFGSFKSNDVLMEPHFRPVSTITTSTTKATTTTTTAP------------EIVSSTTERVPNEVT 207

  Fly   302 EQQLLGGIAGRTIKLNTT------AFQQPSSQEE-EKMASSNGGQSYSEVEDLAFAGLNGTEIPL 359
            :  ...|....||  :||      ..::|.|:.: .::..|....|..||...:......|..|.
  Fly   208 D--TTPGNTNSTI--STTKGTAPPLHEKPESETDIVEIQPSPESNSVYEVVSPSVLSTTSTAKPS 268

  Fly   360 SA---------DERLDLQRNSAEETEEPLPSPEELIAGPRYRLGKRPLPGQKSGSPI---KRKRV 412
            ||         ..:|.|:..|||.:    ||.|.    |....|| |....||.:|:   |||..
  Fly   269 SAAGENIQIIDSPQLGLRNLSAEAS----PSQEP----PTATTGK-PTSVPKSTTPLPIRKRKPA 324

  Fly   413 -TSSLRGRPKTAASSHKPVVTPPNKKCERFTSNMCIR-----------TDDYPLEQIMGS----- 460
             |::....||.:::...|..|         |:.:.||           |.......:...     
  Fly   325 ETTTSAASPKVSSTISTPTTT---------TATLLIRRNVTKYSPASVTTPVSFASLFSGTSSGL 380

  Fly   461 -----IRRHKNAMSALLAEFYDKPNNNLEFSDDFDDFSLSKKRREDEGSAGGMCQSVVRYA---- 516
                 :||.....|:..|.....|......|......|.|...||.:.....|.|..|..|    
  Fly   381 FSPERLRRPLTTTSSTSAPASSPPAGGTPASSSTGSASKSGLLREGQLFQDAMKQEPVAVASNLR 445

  Fly   517 ------------RPQKAKSASGEWKYIVNTGQHTQTLRLEKCSNPV------ESCSYLAQTYRSH 563
                        .|..|.:..||...::|.....|.:..|||::..      :.|         .
  Fly   446 GVNACPVKDEVVAPFWANNTRGEVLALLNLYPFEQYVHWEKCTHEFKQMFCRDGC---------R 501

  Fly   564 CSQVYNYHRLLSWD---KVRGLHVDIFKVPTCCSCQVDGYRQQF---------------PPLSSI 610
            |.|.|..||||::|   :.||:..|.|:.|:.|.|:......:|               |....|
  Fly   502 CEQQYRLHRLLAYDPHNECRGIFSDWFRFPSSCICKCYNIPMEFRATSRSPRSDSRFDAPKSDPI 566

  Fly   611 QAKDYSPQSPVINHSHNGYSTINEEDLDYAEE 642
            :|.:...|..:..|:...:....:| .|:.|:
  Fly   567 EAAEAEVQRAIYEHATEEWYRPRDE-FDFLED 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NT1NP_001261417.1 Spaetzle 508..595 CDD:292695 28/111 (25%)
spz4NP_609504.2 Spaetzle 448..536 CDD:292695 24/96 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23199
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.