DRSC/TRiP Functional Genomics Resources

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Protein Alignment NT1 and spz3

DIOPT Version :10

Sequence 1:NP_729009.2 Gene:NT1 / 38558 FlyBaseID:FBgn0261526 Length:1042 Species:Drosophila melanogaster
Sequence 2:NP_609160.2 Gene:spz3 / 34077 FlyBaseID:FBgn0031959 Length:611 Species:Drosophila melanogaster


Alignment Length:562 Identity:112/562 - (19%)
Similarity:182/562 - (32%) Gaps:208/562 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 SALYH-TPINRREDDLTPEESQQDDQ-LGTIAVEVEPKKVST------EEVQLES--------LE 240
            :::|| ..:.:.:...|.::.||.|| ..:::.:....:.|:      ..:||..        .|
  Fly    98 NSVYHIQQVQQTQQQQTQQQHQQQDQHENSVSFQSSSSRSSSSSTTGQSSIQLTQTHASGRGPAE 162

  Fly   241 DFFDEMGSEVLDP---QMINEALTGDLHDNKTKTFKPENHG------------------------ 278
            ..:.....:...|   |...:....:.|.:.:.|| .:|.|                        
  Fly   163 GSYSRYPGQQAQPPQQQQPQQKQYFNAHGSASATF-TKNSGSFSITSFGSRQQQQQPPQPQQPPP 226

  Fly   279 ------------QRVRRSANEFVHKLTRSV--PASVTEQ-----QLLGGIAGRTIKLNTTAFQQP 324
                        ||.|::..|.....|..|  |.:..|:     ::..|...||.......:...
  Fly   227 SQQQQPPPAPPPQRSRQAKPEAQPAQTYGVAPPENYPERAPGFTRVQAGQGSRTQVHAVLDYDVE 291

  Fly   325 SSQEEEKMASSNGGQSYSEVEDLAFAGLNGTEIPLSADERLDLQRNSAEETEEPLPSPEELIAGP 389
            ..:|:|:......||.|...|:                   |...|:...|..|       |.||
  Fly   292 EGEEDEEEDGEEEGQFYEGQEN-------------------DKSNNNQMPTVTP-------IQGP 330

  Fly   390 RY-RLGKRPL------PGQKSGS----PIKRKRVTSSL---------RGRP----------KTAA 424
            .| :.|..|:      |...:||    ||....::.:|         :|.|          .||.
  Fly   331 IYLKNGTVPVVPLFSYPKLNNGSFLQIPIWWTALSVALGLDVRGDVIKGVPCIKRYHQLFCPTAG 395

  Fly   425 SSHKPVVTPPNKKCERFTSN----MCIRTDDYPLE---------QIMGSIRRHKNAMSALLAEFY 476
            :|:      |..|.|||..:    |.....|:.:.         :..|.:|:.:         |.
  Fly   396 NSY------PIDKIERFIDDNKALMRRMYGDFEMNMEGPGGGGGRQQGKVRKRR---------FI 445

  Fly   477 DKPN-------------NNLEFSDDFDDFSLSKKR-------REDEGSAGG-------------- 507
            |:|:             ..:|..|.:.. .|.|||       |...|||||              
  Fly   446 DEPDIFIPPGAFAANAGETVEAGDSYFG-QLRKKRQAAAGGSRNRGGSAGGSGNGNTNANRQPGN 509

  Fly   508 -----------MCQSVVRYARPQKAKSASGEWKYIVNTGQHTQTLRLEKCSNPVESCSYLAQTYR 561
                       .|:|.:....|..|.:::|:.:.||||....|.:..|.|||        .||.|
  Fly   510 KNGSSGTGRLDACESKIEIVTPYWASNSAGKIRAIVNTQHFEQAIHQEVCSN--------TQTPR 566

  Fly   562 SH----CSQVYNYHRLLSWD---KVRGLHVDIFKVPTCCSCQ 596
            ..    |.|.|.:||||::|   ..:|:.:|.|..|:||.|:
  Fly   567 CEGECGCEQKYKWHRLLAYDPDNDCKGIFMDWFLFPSCCVCR 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NT1NP_729009.2 Spaetzle 508..595 CDD:465007 31/93 (33%)
spz3NP_609160.2 Spaetzle 520..607 CDD:465007 31/94 (33%)

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