DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NT1 and LOC1271912

DIOPT Version :10

Sequence 1:NP_729009.2 Gene:NT1 / 38558 FlyBaseID:FBgn0261526 Length:1042 Species:Drosophila melanogaster
Sequence 2:XP_061514814.1 Gene:LOC1271912 / 1271912 VectorBaseID:AGAMI1_014309 Length:306 Species:Anopheles gambiae


Alignment Length:257 Identity:64/257 - (24%)
Similarity:98/257 - (38%) Gaps:58/257 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   374 ETEEPLPSPEELIA-----GPRYRLGKRPLPGQKSGSPIKRKRVTSSLRGR--PKTAASSHKPVV 431
            :::|..|||.||:|     |...| .|:|: .:...||:  ..|.....|:  ||.|.....||.
Mosquito    66 QSDEVEPSPTELVARAHPSGGSTR-SKQPI-DKNENSPL--LYVVRDAEGKLVPKFADPPKVPVP 126

  Fly   432 TPPNKKCERFTSNMCIRTDDY--PLEQIM-----------GSIRRH--KNAMSALLAEFYDKPNN 481
            ..|..:.::.|.......|:|  .|.::.           ||...|  :..:..:|.:..||   
Mosquito   127 VQPAAQEQQSTDKPFEEGDNYFLKLNELFTNEPGKITFENGSYPPHYPRATIDKILQKNMDK--- 188

  Fly   482 NLEFSDDFDDFSLSKK----RREDEGSAGGMCQSVVRYARPQKAKSASGEWKYIVNTGQHTQTLR 542
               ::|.|:. |:.::    |.:.||.. .:|.|:.....|.|...     ..|||.....|::.
Mosquito   189 ---YADLFEG-SIKREPLSTRVDSEGDK-YLCNSIAHTEYPTKVND-----YMIVNMENFFQSIS 243

  Fly   543 LEKCSNPVESC--SYLAQTYRSHCSQVYNYHRLLS-------WDKVRGLHVDIFKVPTCCSC 595
            .|.|||....|  |:....|...|.|.|..|:|.|       :|.|.      ...|:||.|
Mosquito   244 YETCSNVGGRCSNSHTGHGYELKCQQTYRTHKLFSVAPNANKFDLVE------VTFPSCCKC 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NT1NP_729009.2 Spaetzle 508..595 CDD:465007 26/95 (27%)
LOC1271912XP_061514814.1 None

Return to query results.
Submit another query.