DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15021 and Mmp1b

DIOPT Version :9

Sequence 1:NP_647902.1 Gene:CG15021 / 38546 FlyBaseID:FBgn0035544 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_114396.3 Gene:Mmp1b / 83996 MGIID:1933847 Length:463 Species:Mus musculus


Alignment Length:27 Identity:12/27 - (44%)
Similarity:13/27 - (48%) Gaps:2/27 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FLPLVALLLAAGVHADVSHLDTDLQED 30
            |||  .|.|...||.|:....||..||
Mouse   182 FLP--GLGLGGNVHYDLDQKWTDNNED 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15021NP_647902.1 None
Mmp1bNP_114396.3 PG_binding_1 28..84 CDD:279773
Cysteine switch. /evidence=ECO:0000250 87..94
Metalloprotease. /evidence=ECO:0000250 95..273 12/27 (44%)
Peptidase_M10 105..259 CDD:278824 12/27 (44%)
ZnMc_MMP 105..259 CDD:239805 12/27 (44%)
HX 273..463 CDD:238046
Hemopexin 1 278..321
Hemopexin 2 322..368
Hemopexin 3 371..419
Hemopexin 4 420..463
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1565
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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