DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG15021 and Mmp9

DIOPT Version :9

Sequence 1:	NP_647902.1	Gene:	CG15021 / 38546	FlyBaseID:	FBgn0035544	Length:	420	Species:	Drosophila melanogaster
Sequence 2:	NP_112317.2	Gene:	Mmp9 / 81687	RGDID:	621320	Length:	708	Species:	Rattus norvegicus

Alignment Length:	124	Identity:	42/124 - (33%)
Similarity:	50/124 - (40%)	Gaps:	16/124 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly    17 HA---DVSHLDTDLQEDGYHYKQPSVPFPPPGSGNGIED-SGIGPGPAPSAPAPSYGPPQTRPPP 77
            ||   |.|.:...|....|||.:.| |...... .||:. .|.|..|.|..||.:...||   |.
  Rat   406 HALGLDHSSVPEALMYPMYHYHEDS-PLHEDDI-KGIQHLYGRGSKPDPRPPATTAAEPQ---PT 465

  Fly    78 PPPPPQPT-PPAPRPSYGPPQTQPPRPPPQPTPSAPAPPPPSYGPPQTPPPRPPPQPTP 135
            .||...|| ||...|:.||  |..|...|.|.|:.    ||:.||.:.|.....|...|
  Rat   466 APPTMCPTAPPMAYPTGGP--TVAPTGAPSPGPTG----PPTAGPSEAPTESSTPVDNP 518

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG15021	NP_647902.1	None
Mmp9	NP_112317.2	PG_binding_1	41..95	CDD:396175
		Peptidase_M10	116..445	CDD:395334	12/40 (30%)
		FN2	224..272	CDD:128373
		FN2	282..330	CDD:128373
		FN2	341..389	CDD:128373
		PT	458..489	CDD:282710	13/35 (37%)
		PT	475..510	CDD:282710	15/40 (38%)
		HX	517..707	CDD:238046	1/2 (50%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1565
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900