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Protein Alignment CG15021 and Mmp2

DIOPT Version :9

Sequence 1:	NP_647902.1	Gene:	CG15021 / 38546	FlyBaseID:	FBgn0035544	Length:	420	Species:	Drosophila melanogaster
Sequence 2:	NP_112316.2	Gene:	Mmp2 / 81686	RGDID:	621316	Length:	662	Species:	Rattus norvegicus

Alignment Length:	151	Identity:	35/151 - (23%)
Similarity:	41/151 - (27%)	Gaps:	68/151 - (45%)

- Green bases have known domain annotations that are detailed below.

  Fly   328 YQPRPPAPPAPAPGPTYQPRPPSPPAPPA---------------------------PTYQPQPPA 365
            |.|.|.|......|||    |...|..|.                           .|..|: ..
  Rat   445 YGPSPDADTDTGTGPT----PTLGPVTPEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPR-DK 504

  Fly   366 PPAPAPGPTYQPRPP--------AP----------------PAPTPEYG-PPPPTSGGDEAGSLG 405
            |..|....|:.|..|        ||                .|.|.|.| |.|.||.|     |.
  Rat   505 PTGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSLG-----LP 564

  Fly   406 PD------GYNYNKPAKPFTF 420
            ||      .:|::|..|.:.|
  Rat   565 PDVQQVDAAFNWSKNKKTYIF 585

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.