DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15021 and Mmp11

DIOPT Version :9

Sequence 1:NP_647902.1 Gene:CG15021 / 38546 FlyBaseID:FBgn0035544 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001293113.1 Gene:Mmp11 / 17385 MGIID:97008 Length:492 Species:Mus musculus


Alignment Length:35 Identity:12/35 - (34%)
Similarity:14/35 - (40%) Gaps:2/35 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 YGPPQTPPPRPPPQPTPSAPAPPPSYG--PPQTPP 151
            ||.||..|..|.|..:..|........  .|:|||
Mouse   261 YGRPQMAPTSPAPTLSSQAGTDTNEIALLEPETPP 295

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG15021NP_647902.1 None
Mmp11NP_001293113.1 Cysteine switch. /evidence=ECO:0000250 82..89