Sequence 1: | NP_523927.2 | Gene: | nAChRbeta1 / 38545 | FlyBaseID: | FBgn0000038 | Length: | 521 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_006019.1 | Gene: | HTR3B / 9177 | HGNCID: | 5298 | Length: | 441 | Species: | Homo sapiens |
Alignment Length: | 520 | Identity: | 107/520 - (20%) |
---|---|---|---|
Similarity: | 194/520 - (37%) | Gaps: | 127/520 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MESSCKSWLLCSILVLVAFSLVSASEDEE----RLVRDLFRGYNKLIRPVQNMTQKVGVRFGLAF 61
Fly 62 VQLINVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYEV 126
Fly 127 RYKSNVLIY--PTGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKN 189
Fly 190 FV--DLSDYWKSGTWDIIEVPAYLNVYEGDSNHPTETDITFYIIIRRKTLFYTVNLILPTVLISF 252
Fly 253 LCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVSILVT 317
Fly 318 VIIINWNFRGPRTHRMPMYIRSIFLHYLPAFLFMKRPRKTRLRWMMEMPGMSMPAHPHPSYGSPA 382
Fly 383 ELPKHISAIGGKQSKMEVMELSDLHHPNCKINRKVNSGGELGLGDGCRRESESSDSILLSPEASK 447
Fly 448 A--TEA-------------------VEFIAEHLRNEDLYIQTREDWKYVAMVIDRL--QLYIFFI 489
Fly 490 489 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta1 | NP_523927.2 | LIC | 8..500 | CDD:273305 | 104/513 (20%) |
Neur_chan_LBD | 28..236 | CDD:280998 | 56/215 (26%) | ||
Neur_chan_memb | 243..498 | CDD:280999 | 41/270 (15%) | ||
HTR3B | NP_006019.1 | LIC | 8..435 | CDD:273305 | 104/513 (20%) |
Neur_chan_LBD | 33..239 | CDD:280998 | 56/210 (27%) | ||
Neur_chan_memb | 246..>328 | CDD:280999 | 17/99 (17%) | ||
HA-stretch | 381..413 | 5/31 (16%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |