Sequence 1: | NP_523927.2 | Gene: | nAChRbeta1 / 38545 | FlyBaseID: | FBgn0000038 | Length: | 521 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001287408.1 | Gene: | GluClalpha / 42350 | FlyBaseID: | FBgn0024963 | Length: | 463 | Species: | Drosophila melanogaster |
Alignment Length: | 464 | Identity: | 95/464 - (20%) |
---|---|---|---|
Similarity: | 174/464 - (37%) | Gaps: | 123/464 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 VLVAFSLVSAS---------EDEERLVRDLFRG---YNKLIRP--VQNMTQKVGVRFGLAFVQLI 65
Fly 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRL-PPDKVWKPDIVLFNNADGNYEVRYK 129
Fly 130 SNVL--IYPTGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGS--WTFNGDQVSLALYNNKNF 190
Fly 191 VDLSDYWKSGTWDIIEV-----------PAYLNVYEGDSNHPTETD----ITFYIIIRRKTLFYT 240
Fly 241 VNLILPTVLISFLCVLVFYL-----PAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPL-I 299
Fly 300 AKYLLFTFIMNTVSILVTVIIINWNFRGPRTHRMPMYIRSIFLHYLPAFLFMKRPRKTRLRWMME 364
Fly 365 MP----------------------GMSMPAHPHPSYGSPAELPKHISAIGGKQSKMEVMELSDLH 407
Fly 408 -----HPNC 411 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta1 | NP_523927.2 | LIC | 8..500 | CDD:273305 | 95/464 (20%) |
Neur_chan_LBD | 28..236 | CDD:280998 | 53/232 (23%) | ||
Neur_chan_memb | 243..498 | CDD:280999 | 35/202 (17%) | ||
GluClalpha | NP_001287408.1 | LIC | 3..455 | CDD:273305 | 95/464 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447361 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |