Sequence 1: | NP_523927.2 | Gene: | nAChRbeta1 / 38545 | FlyBaseID: | FBgn0000038 | Length: | 521 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261898.1 | Gene: | pHCl-1 / 39730 | FlyBaseID: | FBgn0264908 | Length: | 978 | Species: | Drosophila melanogaster |
Alignment Length: | 513 | Identity: | 99/513 - (19%) |
---|---|---|---|
Similarity: | 178/513 - (34%) | Gaps: | 143/513 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 ASEDEERLVRDLF---RGYNK-LIRPV-----------------QNMTQ-----KVGVRFGLAFV 62
Fly 63 QLINVNEKNQIMKSNVWLRLVWYDYQLQW-DEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYEV 126
Fly 127 RYKSNVL-------IYPTGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLAL 184
Fly 185 YNNKNFVDLSDYWKSGTWDIIEVPAYL----------NVYEGDSNHPTETDITFYIIIRRKTLFY 239
Fly 240 TVNLILPTVLISFLCVLVFYL-----PAEAGEKVTLGISILLSLVVFLLLVSKILPPTS-LVLPL 298
Fly 299 IAKYLLFTFIMNTVSILVTVIIINWNFR-------------GPRTHRMPMYIRSIFLHYLPAFLF 350
Fly 351 MKRPRKTRLRWMMEMPGMSMPAHPHP-SYGSPAEL-------------PKHISAIGGKQSKMEVM 401
Fly 402 ELSDLHHPNCKINRKVNSGGELGL------GDGCRRESESSDSILLSPEAS-KATEAV 452 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta1 | NP_523927.2 | LIC | 8..500 | CDD:273305 | 99/513 (19%) |
Neur_chan_LBD | 28..236 | CDD:280998 | 47/251 (19%) | ||
Neur_chan_memb | 243..498 | CDD:280999 | 49/250 (20%) | ||
pHCl-1 | NP_001261898.1 | Neur_chan_LBD | 338..566 | CDD:280998 | 46/248 (19%) |
Neur_chan_memb | 578..>682 | CDD:280999 | 21/110 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |