Sequence 1: | NP_523927.2 | Gene: | nAChRbeta1 / 38545 | FlyBaseID: | FBgn0000038 | Length: | 521 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_998786.3 | Gene: | HTR3A / 3359 | HGNCID: | 5297 | Length: | 510 | Species: | Homo sapiens |
Alignment Length: | 548 | Identity: | 138/548 - (25%) |
---|---|---|---|
Similarity: | 239/548 - (43%) | Gaps: | 104/548 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 WLLCSILVLVAFSLVSASEDEE----------RLVRDLFRGYNKLIRPVQNMTQKVGVRFGLAFV 62
Fly 63 QLINVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVL--FNNADGNYE 125
Fly 126 VRYKSNVLIYPTGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYN--NK 188
Fly 189 NFVDLSDYWKSGTWDIIEVPAYLNVYEGDSNHPTETDITFYIIIRRKTLFYTVNLILPTVLISFL 253
Fly 254 CVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAK----------------- 301
Fly 302 ---------------YLLFTFIMNTVSILVTVIIINWNFRGPRTHRMPMYIRSIFLHYLPAFLFM 351
Fly 352 KRPRKTRLRWMMEMPGMSMPAHPHPSYGSPAELPKHISAIGGKQSKMEVMELSDLHHPNCKINRK 416
Fly 417 VNSGGELGLGDGCRRESESSDSILLSP-----EASKAT----EAVEFIAEHLRNEDLYIQTREDW 472
Fly 473 KYVAMVIDRLQLYIFFIVTTAGTVGILM 500 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta1 | NP_523927.2 | LIC | 8..500 | CDD:273305 | 137/546 (25%) |
Neur_chan_LBD | 28..236 | CDD:280998 | 64/221 (29%) | ||
Neur_chan_memb | 243..498 | CDD:280999 | 64/295 (22%) | ||
HTR3A | NP_998786.3 | LIC | 23..504 | CDD:273305 | 133/529 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |