Sequence 1: | NP_523927.2 | Gene: | nAChRbeta1 / 38545 | FlyBaseID: | FBgn0000038 | Length: | 521 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
Alignment Length: | 396 | Identity: | 94/396 - (23%) |
---|---|---|---|
Similarity: | 172/396 - (43%) | Gaps: | 60/396 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 ERLVRDLFRGYNKLIRPV-QNMTQKVGVRFGLAFVQLINVNEKNQIMKSNVWLRLVWYDYQLQWD 92
Fly 93 EADYGGIGVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPTGEVLWVPPAIYQSSCTIDVT 157
Fly 158 YFPFDQQTCIMKFGSW----------TFNGDQVSLALYNNKNFVDLSDYWKSGTWDIIEVPAYL- 211
Fly 212 -NVYEGDSNHPTETDITFYIIIRRKTLFYTVNLILPTVLISFLCVLVFYLPAE-AGEKVTLGISI 274
Fly 275 LLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVSILVTVIIINWNFRGPRTHRMPMYIRS 339
Fly 340 IFLHYLPAFLFM--------KRPRKTRLRWMMEMPGMSMPAHPHPSYGSPAELP---KHISAIGG 393
Fly 394 KQSKME 399 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta1 | NP_523927.2 | LIC | 8..500 | CDD:273305 | 94/396 (24%) |
Neur_chan_LBD | 28..236 | CDD:280998 | 57/219 (26%) | ||
Neur_chan_memb | 243..498 | CDD:280999 | 35/169 (21%) | ||
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 94/396 (24%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 56/218 (26%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 35/169 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447343 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.840 |