Sequence 1: | NP_523927.2 | Gene: | nAChRbeta1 / 38545 | FlyBaseID: | FBgn0000038 | Length: | 521 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_504024.2 | Gene: | acr-23 / 191606 | WormBaseID: | WBGene00000062 | Length: | 545 | Species: | Caenorhabditis elegans |
Alignment Length: | 549 | Identity: | 132/549 - (24%) |
---|---|---|---|
Similarity: | 226/549 - (41%) | Gaps: | 130/549 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 LVRDLFRGYNKLIRPVQNMTQKVGVRFGLAFVQLINVNEKNQIMKSNVWLRLVWYDYQLQWDEAD 95
Fly 96 YGGIGVLRLPPDKVWKPDIVLFNNADGNYEVRYK-SNVLIYPTG-------EVLWVPPAIYQSSC 152
Fly 153 TIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNF----VDLSDYWKSGTWDIIEVPAYLNV 213
Fly 214 YEGDSNH---PTETDITFY-IIIRRKTLFYTVNLILPTVLISFLCVLVFYLPAE----------- 263
Fly 264 ----AGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVSI----LVTVII 320
Fly 321 I---------------NWNFRGPRTHRMPMYIRSIFLHYLPAFLFMKRPRKTRLRWMMEMPGMSM 370
Fly 371 PAHPHPSYGSPAELPKHISAIGGKQSK-MEVMELSDLHHPNCKINRKVNSG------------GE 422
Fly 423 LGLGDGCRRESESSDSILLSPEASKATEAVEF-----------IAEHLRNEDLYIQ---TRE--- 470
Fly 471 -DWKYVAMVIDRLQLYIFFIVTTAGTVGI 498 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta1 | NP_523927.2 | LIC | 8..500 | CDD:273305 | 132/549 (24%) |
Neur_chan_LBD | 28..236 | CDD:280998 | 60/220 (27%) | ||
Neur_chan_memb | 243..498 | CDD:280999 | 66/319 (21%) | ||
acr-23 | NP_504024.2 | Neur_chan_LBD | 27..242 | CDD:280998 | 60/220 (27%) |
Neur_chan_memb | 249..529 | CDD:280999 | 66/319 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |