Sequence 1: | NP_523927.2 | Gene: | nAChRbeta1 / 38545 | FlyBaseID: | FBgn0000038 | Length: | 521 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_506868.2 | Gene: | acr-18 / 191604 | WormBaseID: | WBGene00000057 | Length: | 510 | Species: | Caenorhabditis elegans |
Alignment Length: | 515 | Identity: | 137/515 - (26%) |
---|---|---|---|
Similarity: | 247/515 - (47%) | Gaps: | 71/515 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 LVRDLFRGYNKLIRPVQNMTQ--KVGVRFGLAFVQLINVNEKNQIMKSNVWLRLVWYDYQLQWDE 93
Fly 94 ADYGGIGVLRLPPDKVWKPDIVLFNNADGNYEV-RYKSNVLIYPTGEVLWVPPAIYQSSCTIDVT 157
Fly 158 YFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIIE--VPAYLNVYEGDSNH 220
Fly 221 PTETDITFYIIIRRKTLFYTVNLILPTVLISFLCVLVFYLP----AEAGEKVTLGISILLSLVVF 281
Fly 282 LLLVSKILPPTSLVLPLIAKYLLFTFIMNTVSILVTVIIINWNFRGPRTHRMPMYIRSIFLHYLP 346
Fly 347 -------AFLFMKRPRKTRLR------------WMMEMPGMSMPA-HPHPSYGSPAELPKHISAI 391
Fly 392 GGKQSKMEVMELSDLHHPNCKINRKVNSGGELGLGDGCRRESESSDSILLSPEASKATEAVEFIA 456
Fly 457 EHLRNEDLYIQTREDWKYVAMVIDRLQLYIFFIVTTAGTVGIL--MDAPHIFEYVDQDRI 514 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta1 | NP_523927.2 | LIC | 8..500 | CDD:273305 | 134/499 (27%) |
Neur_chan_LBD | 28..236 | CDD:280998 | 70/209 (33%) | ||
Neur_chan_memb | 243..498 | CDD:280999 | 62/278 (22%) | ||
acr-18 | NP_506868.2 | Neur_chan_LBD | 33..237 | CDD:280998 | 70/209 (33%) |
Neur_chan_memb | 244..486 | CDD:280999 | 62/275 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |