Sequence 1: | NP_523927.2 | Gene: | nAChRbeta1 / 38545 | FlyBaseID: | FBgn0000038 | Length: | 521 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001361818.1 | Gene: | acr-8 / 181246 | WormBaseID: | WBGene00000047 | Length: | 540 | Species: | Caenorhabditis elegans |
Alignment Length: | 515 | Identity: | 185/515 - (35%) |
---|---|---|---|
Similarity: | 285/515 - (55%) | Gaps: | 71/515 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 FSLVSASEDEERLVRDLFRGYNKLIRPVQNMTQKVGVRFGLAFVQLINVNEKNQIMKSNVWLRLV 83
Fly 84 WYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPTGEVLWVPPAIY 148
Fly 149 QSSCTIDVTYFPFDQQTCIMKFGSWTFNG---DQVSLALYN----NK-----------NFVDLSD 195
Fly 196 YWKSGTWDIIEVPA--YLNVYEGDSNHPTETDITFYIIIRRKTLFYTVNLILPTVLISFLCVLVF 258
Fly 259 YLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVSILVTVIIINW 323
Fly 324 NFRGPRTHRMPMYIRSIFLHYLPAFLFMKRPRKTRLRWMMEMPGMSMPAHPHPSYGSPAELPKHI 388
Fly 389 SAIGGKQSKMEVMELSDLHHPN---CKINRKVNSGGELGLGDGCRRESESSDSILLSPEASKATE 450
Fly 451 AVEFIAEH---LRNEDLYIQTREDWKYVAMVIDRLQLYIFFIVTTAGTVGILMDAPHIFE 507 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta1 | NP_523927.2 | LIC | 8..500 | CDD:273305 | 182/506 (36%) |
Neur_chan_LBD | 28..236 | CDD:280998 | 91/227 (40%) | ||
Neur_chan_memb | 243..498 | CDD:280999 | 81/260 (31%) | ||
acr-8 | NP_001361818.1 | LGIC_ECD | 24..255 | CDD:355788 | 93/230 (40%) |
Neur_chan_memb | 260..476 | CDD:367256 | 81/260 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
5 | 4.780 |